| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1284 |
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| Symbol | |
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| ID | 8807048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1361339 |
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| End bp | 1362418 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003460528 |
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| Protein GI | 289208462 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.920769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAT CCCGGAAGCC GGTCGATTCG GAACTGGACG ACGAACACCT GATGGATGAG
GGAACCGGCC TGTCGGGTGA GGAGCATCCT GCCGAACACC TCGGCGCGAC CCGCGACCCT
CTGGCGACTG AAGAGAGTCC CGAGGAGGTC GATGATGTCC CGGCCCCGGA AGACGAGAAG
GAGCTGTCCC CGGAACAGGA TGTCCCGGTA CGTCCCCGAA CACTGCGTGA TGCCCGCCCG
GCCGAGCTCG ACGCCATCCA GATCTACCTG CGTGACATTG AATACCGGCC GCTGCTGACC
CCCGAAGAAG AGCGAAAGTA TGCGCGCCTG GCCCGCGATG GCGATGAATC CGGGCGCCGA
CGCATGATCG AGTGCAACCT TCGGCTGGTG GTGAAGATCG CGCGGCGTTA CCTGAATCGC
GGTCTGCCGC TGCTGGATCT GATCGAGGAG GGCAATCTGG GCCTGATGCA CGCCGTGGAG
AAATTCGATC CCGAACGCGG CTTTCGTTTC TCGACCTACG CGACCTGGTG GATCCGCCAG
ACGATTGAGC GGGCCCTGAT GAACCAGGGG CGCACGATTC GCATCCCGGT GCATGTCAGC
AAGGAGTTGC GCATGCATGC GCGGATCGCC CGTAACCTGA CCCAGGAGCT GGGTCGCGAT
CCCACCGAGG AAGAGTTGGC CCAGCGCCTG GGCAAGCCCG TGGCCGACAT CCAGAAACTC
CGGGCGATGT CCGAGCCCTC AACCTCCATG GACCTGCCGC CCGGGCCGGA CGGCGAGCGT
TCCCTCACGG ATATCCTGGC GGACGTGAAT GCACAGGAGC CGTCGTCGCT GCTGGAGGAT
CAGGACATTC AGCACCTGGT GGACGAGTGG CTGGGTGAAC TGGATTACAA GCAGCGCGAG
GTGCTGGTGC GACGGTTCGG ATTGCATGGA TTCGAGCGCT CGACCCTGGA GCAGGTGGGG
GCCGAGATCG GCGTGACACG GGAGCGGGTG CGCCAGATTC AGATGGATGC CCTGAAGCGC
TTGCGGCGTT TGCTTGAATC GCGCGGGATG AAGGGCGACG AAGTGCTGCC CAATTCCTGA
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| Protein sequence | MAKSRKPVDS ELDDEHLMDE GTGLSGEEHP AEHLGATRDP LATEESPEEV DDVPAPEDEK
ELSPEQDVPV RPRTLRDARP AELDAIQIYL RDIEYRPLLT PEEERKYARL ARDGDESGRR
RMIECNLRLV VKIARRYLNR GLPLLDLIEE GNLGLMHAVE KFDPERGFRF STYATWWIRQ
TIERALMNQG RTIRIPVHVS KELRMHARIA RNLTQELGRD PTEEELAQRL GKPVADIQKL
RAMSEPSTSM DLPPGPDGER SLTDILADVN AQEPSSLLED QDIQHLVDEW LGELDYKQRE
VLVRRFGLHG FERSTLEQVG AEIGVTRERV RQIQMDALKR LRRLLESRGM KGDEVLPNS
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