| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1275 |
|---|
| Symbol | |
|---|
| ID | 8807039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1350909 |
|---|
| End bp | 1351898 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | TIM-barrel protein, yjbN family |
|---|
| Protein accession | YP_003460520 |
|---|
| Protein GI | 289208454 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGGCT CGTTGCGTTT TCCCGATCCG CGCTTTTCGG TGGCGCCGAT GATGGACTGG
ACCGACTCCT GGTGCCGGCG TTTCCATCGG CTGCTGACCC GGCGCGCGCT GTTGTACACC
GAAATGGTAC ACGCCAACGC GGTGATCCAC GGCGATCGCG ACCGGCTGCT GGGCCATGTC
GCGGCGGAAC ACCCGCTGGC GCTGCAGCTA GGTGGATCGG ATCCCGACAC GCTCGCTCAG
GCCGCCCGCA TCGCGGCAGA GCGAGGCTTC GACGAGATCA ACCTGAACGT CGGCTGTCCC
TCCGACCGTG TACAGTCGGG CACGTTCGGC GCCTGCCTGA TGGCGCAGCC GGAGCAGGTG
GCCCGGATGG TGCGCGCGAT GCAGGATGCC GTCGATGTTC CGGTGACCGT CAAGCATCGT
ATCGGGATTG ACGAACAGGA TTCCGAGGCC GATCTGCGCA ACTTTGTCGA AACCGTGGCG
CGAGGCGGCT GCCGGCATTT CATCGTGCAT GCCCGCAAGG CGTGGCTGCA AGGCCTGAGC
CCCAAGGACA ACCGCGATGT TCCGCCGCTT GACTACGAGC GCGTGTTCCG CCTTAAGGCG
GAATTCCCGG AACTGACCAT CGTACTGAAT GGCGGCCTGG ACGATGTCCG TGTGGCACAC
GGCTATCTCG AGCGGGTAGA CGGGGTGATG TTCGGGCGGC TGGCCTACCA CCAGCCCTGG
GTGCTGGCCG AGGTCGACCG TCTGTTTTTC GACGAGACCG GTGGGGTGAC GCGCGAGGCC
GTGCTGCAGG GTCTGATCGA CATGGCCCGC GAGATGCGCG CCAAGGGCGT ACCGCTGGCG
CGGCTCACAC GGCATGTGCT GGGGTTGTTT CACGGCGAGC CGGGGGCGCG CCAGTGGCGG
CGTATCCTGA CCGAGGGTGC GCACCGGGCG GATGCCGGAC CGGAGCTGAT CGAGCGTGCG
GCGGAGCCAT GCCTGCGCGC CTGTACCTGA
|
|---|
| Protein sequence | MTGSLRFPDP RFSVAPMMDW TDSWCRRFHR LLTRRALLYT EMVHANAVIH GDRDRLLGHV
AAEHPLALQL GGSDPDTLAQ AARIAAERGF DEINLNVGCP SDRVQSGTFG ACLMAQPEQV
ARMVRAMQDA VDVPVTVKHR IGIDEQDSEA DLRNFVETVA RGGCRHFIVH ARKAWLQGLS
PKDNRDVPPL DYERVFRLKA EFPELTIVLN GGLDDVRVAH GYLERVDGVM FGRLAYHQPW
VLAEVDRLFF DETGGVTREA VLQGLIDMAR EMRAKGVPLA RLTRHVLGLF HGEPGARQWR
RILTEGAHRA DAGPELIERA AEPCLRACT
|
|---|
| |