| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1242 |
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| Symbol | |
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| ID | 8807006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1315674 |
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| End bp | 1317707 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | excinuclease ABC, B subunit |
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| Protein accession | YP_003460487 |
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| Protein GI | 289208421 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCCAG ATGAAGGCGA ACAATTCAAG GTGGTATCGC AGTATCAGCC CGCCGGCGAT
CAGCCGGCGG CGATCCGCGC GCTGACCGAT GGCATCGAGG CCGGGCTGGC CCACCAGGTC
CTGCTCGGTG TGACGGGGTC GGGCAAGACC TTCACGATCG CCAACGTCGT CGAGAATCTG
CAGCGTCCGA CCATCATCCT GGCACCGAAC AAGACCCTGG CCGCGCAGCT GTATGGCGAG
TTCAAGGAGT TCTTCCCGAA CAACGCGGTG GAGTACTTCG TCTCGTACTA CGACTACTAC
CAGCCGGAGG CCTACGTCCC GTCCTCGGAC ACCTACATCG AGAAGGATGC CTCGATCAAC
GACCACATCG AACAGATGCG CCTGTCCGCG ACGCGTGCCC TGCTGGAACG CCGGGATGCC
ATCATCGTGG CTTCGGTGTC GGCCATCTAC GGCCTCGGTG ATCCGCGCAA ATACCTGTCC
ATGGTCCTGC ACCTCCAGCG CGGGGACCGT ATCGACCAGC GGGACCTGCT GCGCCGTCTG
GCGGAACTGC AGTACACCCG TAACGACACC GAGCTGCGGC GCGCCACCTA CCGCGTACGC
GGGGAGGTGA TCGACATCCA TCCCGCGGAA TCCGAGATCG AGGCCGTGCG CATCGAGTTG
TTCGACGACG AGATCGAGCG GCTATCGTAC TTCGACCCGC TGACCGGTGA GCAGCTGCGT
ACCGTCCCGC GCCTGACCAT CTACCCGAAG ACGCACTACG TGACCCCGCG CGAGACGTTG
CTGGGCGCGG TGGATCAGAT TCGCGACGAG CTCAAGGAGC GTCTGGATTT CCTGCGCAAG
GAGGATCGCC TGGTCGAGGC GCAGCGCCTG GAGCAGCGCA CCCTGTTCGA TCTGGAGATG
ATCCTGGAGA TCGGCTACTG CAACGGTATC GAAAACTACT CGCGCTATCT CTCCGGCCGG
GCCCCGGGCG AGCCGCCGCC CACCTTCTTC GACTACCTGC CGAAGGACGC GCTGCTGGTG
GTTGATGAGT CGCATGTGTC GGTGCCCCAG GTGGGCGGGA TGTACAAGGG CGACCGCTCG
CGCAAGGAGA CGCTGGTGGA ATACGGCTTC CGTCTGCCCT CGGCGCTGGA CAACCGCCCC
CTGCGCTTCG AGGAGTTCGA GGCCCTGCAG CCGCAGACCA TCTACGTCTC GGCCACACCG
GGGCCGTACG AGCGCGAGCA TGCCGGGGCC ATCGTCGATC AGGTCGTCCG GCCCACCGGG
CTTCTGGACC CGATTCTCGA GGTGCGCCCG GCGGGCAGCC AGGTCGACGA CTGTCTGTCC
GAGGTGCGCG ACCGGGTGGA GCGCGACGAG CGTGTATTGA TCACGACGCT GACCAAGCGC
ATGGCCGAGG ACCTGACCGA CTATCTCTCG GAACACGGCG TGCGGGTGCG CTATCTGCAT
TCGGATATCG ACACCGTCGA GCGTATGGAG ATCATCCGCG ACCTGCGCCT CGGGGAGTTT
GACGTGCTGG TGGGGATCAA CTTGCTGCGC GAGGGCCTGG ACATGCCCGA GGTCTCGCTG
GTGGCGATCT TTGACGCCGA CAAGGAGGGC TTCCTGCGCT CCGATCGCTC GCTGATTCAG
ACCATCGGGC GGGCGGCACG CAACGTGAAC GGCAAGGCCA TCCTGTACGC CGACAAGGTC
ACCGGATCGA TGCAAAGGGC GATCGACGAG ACCGAGCGCC GGCGGGAGAA GCAGATCGCC
CATAACGAGG CGCACGGCAT CACCCCGCAG GGCATTCGCA AGAATGTCGC CGACATCCTC
GAGGCCCGTA ATGCCACGCC GGGCTCCGGT CGCCGGCGTG GCCAGAAAAA GGTGGCCGAA
GAGGCGCCGG ATTACATCGA CGCCCCGGAG CAGGCCGCCA AGGAGATCGA AAAGCTGGAA
CAGGAGATGT TCCAGAAGGC TCGCGACCTG GAGTTCGAGG AGGCCGCGCG GATCCGTGAC
CGCATCGAGA AGCTCAAAGC ACTCGCGTTC CGCCCGGAAG CCTCGCTATC CTAA
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| Protein sequence | MQPDEGEQFK VVSQYQPAGD QPAAIRALTD GIEAGLAHQV LLGVTGSGKT FTIANVVENL
QRPTIILAPN KTLAAQLYGE FKEFFPNNAV EYFVSYYDYY QPEAYVPSSD TYIEKDASIN
DHIEQMRLSA TRALLERRDA IIVASVSAIY GLGDPRKYLS MVLHLQRGDR IDQRDLLRRL
AELQYTRNDT ELRRATYRVR GEVIDIHPAE SEIEAVRIEL FDDEIERLSY FDPLTGEQLR
TVPRLTIYPK THYVTPRETL LGAVDQIRDE LKERLDFLRK EDRLVEAQRL EQRTLFDLEM
ILEIGYCNGI ENYSRYLSGR APGEPPPTFF DYLPKDALLV VDESHVSVPQ VGGMYKGDRS
RKETLVEYGF RLPSALDNRP LRFEEFEALQ PQTIYVSATP GPYEREHAGA IVDQVVRPTG
LLDPILEVRP AGSQVDDCLS EVRDRVERDE RVLITTLTKR MAEDLTDYLS EHGVRVRYLH
SDIDTVERME IIRDLRLGEF DVLVGINLLR EGLDMPEVSL VAIFDADKEG FLRSDRSLIQ
TIGRAARNVN GKAILYADKV TGSMQRAIDE TERRREKQIA HNEAHGITPQ GIRKNVADIL
EARNATPGSG RRRGQKKVAE EAPDYIDAPE QAAKEIEKLE QEMFQKARDL EFEEAARIRD
RIEKLKALAF RPEASLS
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