| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1225 |
|---|
| Symbol | |
|---|
| ID | 8806987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1302397 |
|---|
| End bp | 1302864 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | cytochrome c prime |
|---|
| Protein accession | YP_003460470 |
|---|
| Protein GI | 289208404 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.239177 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC CCCTTCGTTT TCTGACTGCG GCTTCCGTTG CCGGGACCCT GGCGTTGGGC
TTGGGTGCTG TGCATTCCGT ACATGCCTTT GACGAGCACG AGGCCACTAT TGATTACCGT
CAGGGCGTGA TGCGGTCCAT CGGCGGGAAC GTCGGCTCCA TCGCCGCAGT CGTTGTCGAC
GGCGCCGAAT TCGGCGACAA CCTCGAGATG CACACCAGGC ATCTGGTGGA TCTCACCGCG
GACATCCCGG CACTGTTCCC TGAAGGCAGT GATTTCCCCG ATACCGATGC CAAAGAGGAG
ATCTGGGACG ACTGGGACCG GTTCAAGGAG CTCTCTCAGG ACACCAAGGA TGCGGCCGAG
GCATTGCATG CCGCGGTTGA AGCCGGTGAC GACGACGAAC TCCCGATTCG CTTCCGTAAC
CTGGGGCAAT CCTGCCAGGC CTGCCACGAC GACTTCCGCC GCGACTGA
|
|---|
| Protein sequence | MKKPLRFLTA ASVAGTLALG LGAVHSVHAF DEHEATIDYR QGVMRSIGGN VGSIAAVVVD
GAEFGDNLEM HTRHLVDLTA DIPALFPEGS DFPDTDAKEE IWDDWDRFKE LSQDTKDAAE
ALHAAVEAGD DDELPIRFRN LGQSCQACHD DFRRD
|
|---|
| |