Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1223 |
Symbol | |
ID | 8806985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1300955 |
End bp | 1301503 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | NUDIX hydrolase |
Protein accession | YP_003460468 |
Protein GI | 289208402 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.186298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCGTG ACGTCAGCAT CCCCCGCCCC GAATTTCACC GGGCCGTGCC CGAAAATGAT GACCGCGAAC GCAAGATCTG CAGTCACTGT GGCTTCGTGG ACTACGAGAA CCCGCGGATT GTGGTGGGCG TCGTCGCCAC ATGGGGAGAG CGGGTCCTGT TGTGCCGCCG GGCGATCGAG CCGCGCAAGG GTCACTGGAC GCTGCCCGCA GGATACATGG AGCTCGGCGA GTCGACCGAG CAGGGCGCCG AGCGAGAGGC CTGGGAGGAG GCGCGCGCCC GGCTGCGTAT TGATCGCCTG CTCGCGGTCT ACAGTCTGCC GCACATCGGA CAGGTGCAGA TGATCTACCG CGCCGAGCTG CTGGGGGACG ACGTTGCCCC CGGACCCGAG TCCAAGGAGG TCGCGCTGTT CGACTTCAAT GATCTGCCCG GGGAGCTCGC GTTTCCGTCG GTGTCCTGGG CCCTGGGGCA CTACCAGCAA ACGCGCCACC TGGGCGAATT TTCGCCGATG GGCGCCCCGG AGTCCGCGAG TCCGCTGGGC GGGTTGTAG
|
Protein sequence | MSRDVSIPRP EFHRAVPEND DRERKICSHC GFVDYENPRI VVGVVATWGE RVLLCRRAIE PRKGHWTLPA GYMELGESTE QGAEREAWEE ARARLRIDRL LAVYSLPHIG QVQMIYRAEL LGDDVAPGPE SKEVALFDFN DLPGELAFPS VSWALGHYQQ TRHLGEFSPM GAPESASPLG GL
|
| |