| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1220 |
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| Symbol | |
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| ID | 8806982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1298086 |
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| End bp | 1298772 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003460465 |
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| Protein GI | 289208399 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.231981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACC CGGACCCGCG CCACCCCGAT TTCAGCATGA TGCCACCGGT GATCGGCTTT
TTGCTGATCA CCAACGTGGC GCTCTTTCTT GCCCTGCCCT GGCTGGGCGA CTGGCTGATG
ACCCATTTCG CCCTGTGGCC CATCGGAACG CCATCGATGA TCCTGCAGGA CGGGCAATGG
CTACGTGTGC CGGACTTCCA GCTCTGGCAG CTGTTGACCT ACGGGTTCCT GCACGGAGGC
CTCGTTCACC TCTCGGTGAA CATGTTTGCC GTCTGGATGC TGGGAGTGCA GATCGAGAAC
GCCTGGGGCT CCAGGACCTT CGCCCTGTAC TTCCTCATCT GCGTGATCGG CGCAGGGCTG
GTACAGCTTA TGGTCACCGC CTATGGCGAC AATGGGATGG TCTATCCCAC TGTTGGGGCA
TCCGGCGGCG TGTTCGGGGT CTTGCTGGCG TTCGGGATGA TGTTCCCCAA CCAGCGGCTT
TATCTGTTCT TCCTGCCGAT CCCCATCAAG GCAAAGTACT TCGTCATCGC CTACGGCGCC
CTGGAACTCT ACCTGGGGAT CTCGGGCACC CTCGCCGGTA TTGCGCATTT CGCGCATCTG
GGCGGGATGG CGTTCGGCTT CCTCGCCATC CAGTACTGGC GCGGAAGGCT TCCGATACGT
CCGCGTCAGC GGAGGTTCTG GTGGTGA
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| Protein sequence | MTHPDPRHPD FSMMPPVIGF LLITNVALFL ALPWLGDWLM THFALWPIGT PSMILQDGQW
LRVPDFQLWQ LLTYGFLHGG LVHLSVNMFA VWMLGVQIEN AWGSRTFALY FLICVIGAGL
VQLMVTAYGD NGMVYPTVGA SGGVFGVLLA FGMMFPNQRL YLFFLPIPIK AKYFVIAYGA
LELYLGISGT LAGIAHFAHL GGMAFGFLAI QYWRGRLPIR PRQRRFWW
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