| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1216 |
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| Symbol | |
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| ID | 8806978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1294806 |
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| End bp | 1296032 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_003460461 |
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| Protein GI | 289208395 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.608666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.251224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAACG ACTGGTTCTG GCTCTTGCTG CCCGTGGCGG CGGCAAGCGG CTGGTGGGTA
GCCCGTCGCG TCCACCCGGA AGACCCAGGG GACCAGGAAC CTTCCCTTCA CCGTTACCTT
GAGGGCGTCC GATATCTGCT GGACGACCGT ACCGATGATG CCTTGCAGGC CTTCATCGAG
ATGGTGGAGG TCGACCACGA AACCTTTGAG ACCCATGTGA TTCTTGGACG CCTGTTCCGG
CGTCGAGGCG AGGTCGATCG GGCGATCCGG ATCCATCAGA ACCTGGTGGC GCGTCCTTCT
CTGAAGGACG AGCAGCGGGC CCAGGCGCTG AACGAGCTCG GGCAGGACTT TCTGCTAGCC
GGCGTTCTCG ATCGGGCCGA GGCGGTCTTC CGCGAGCTTG CGGACTCGCC GCATCAGGCG
GTGCAGGCGC TGAAGGGCCT GCAGCATGTC TATGAAACCC AGCGTGAATG GGAGCGCGCG
ATCGAGGTCG GCACACGACT GAAAGCGCAT AACGTGCCGA ATGAACATCT TCGAATCGCG
CATTATCACT GTGAGTTGGC GACTATTGCG CTGGAGCAAG GTGACCGCTC AACCTCCGCC
GAGCGAGCGG CACAAGCAGA GGGGCTGGTC CCTGGGCTGT CGCGCGCGCT GCTGATCAAG
TCCGAGATCG CGGAACGCGA AGACCGCATC GCCGATGCGA TTGCATGCGG CCGTGAGGCC
GTGGCCCGTA CGCCACCGCT GGCACCCCTG GTCGTGCCGC GCCTCGAGCG GTTGCACCAG
GCACTGCCAG GTGAGAACCG CCTGGGGCAG CTGGAGCAAA CCCTGGAAGA TCTGGCGAAC
AGCCGCGGTA TCACCGTGGC GCGGATCGCA CTGATGCGGT TGTACCGTCG CACCGGGCGG
CTGGATGCCG CACTCTCCGA ACTCGGGATG ATCCTTTCGC AACGCCCGGT GCCGACATCG
GGCTTGCTCG AGGCCGTGCG CTGGATGAAG ATTCTCCCCG CGGTGCAGGA ATACAGTGTG
GAGTTCGCCG CGTTCGAGAA AGCGCTTTCG GATCAGCTCG GAAGCCAGCA TCTGTACCAG
TGCATGAACT GTGGCTACCA GGGTCGAGCG CACGTCTGGC AATGTCCGAG CTGTCGCCGA
TGGGATACCC TGCGGGGGCT GGATTTTGAA CTCGATGCCT CTACCGAGGA GGCTGAAGAT
GCGCTGGTCC GCGAAGGGAC GCGCTGA
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| Protein sequence | MINDWFWLLL PVAAASGWWV ARRVHPEDPG DQEPSLHRYL EGVRYLLDDR TDDALQAFIE
MVEVDHETFE THVILGRLFR RRGEVDRAIR IHQNLVARPS LKDEQRAQAL NELGQDFLLA
GVLDRAEAVF RELADSPHQA VQALKGLQHV YETQREWERA IEVGTRLKAH NVPNEHLRIA
HYHCELATIA LEQGDRSTSA ERAAQAEGLV PGLSRALLIK SEIAEREDRI ADAIACGREA
VARTPPLAPL VVPRLERLHQ ALPGENRLGQ LEQTLEDLAN SRGITVARIA LMRLYRRTGR
LDAALSELGM ILSQRPVPTS GLLEAVRWMK ILPAVQEYSV EFAAFEKALS DQLGSQHLYQ
CMNCGYQGRA HVWQCPSCRR WDTLRGLDFE LDASTEEAED ALVREGTR
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