| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1204 |
|---|
| Symbol | |
|---|
| ID | 8806966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1281932 |
|---|
| End bp | 1284544 |
|---|
| Gene Length | 2613 bp |
|---|
| Protein Length | 870 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | DNA gyrase, A subunit |
|---|
| Protein accession | YP_003460449 |
|---|
| Protein GI | 289208383 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.41811 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.143456 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAT TTGCCAAGGA AATCTTCCCG GTCAATCTCG AAGACGAGAT GCAGCAGTCC
TACCTCGATT ACGCGATGAG CGTAATCGTG GGCCGGGCCC TCCCCGATGT CCGTGACGGC
CTCAAGCCGG TCCATCGCCG CGTGCTCTAC GCGATGCGCG AGCTGGGCAA CGACTACAAC
AAGCCGTACA AGAAGTCGGC GCGCGTGGTC GGTGACGTGA TCGGTAAATA CCACCCGCAT
GGTGACTCCG CCGTCTACGA CGCCATCGTG CGCATGGCGC AGCCGTTCTC GATGCGCTAC
ATGCTGGCCG ACGGGCAGGG CAACTTCGGC TCCATTGACG GTGATTCCCC GGCCGCCATG
CGTTATACCG AGGTGCGCAT GGCGCGCATC GCGGCCGAGC TGCTGGCCGA TATCGACAAG
GAAACCGTCG ACTTCATCGA CAACTACGAC GGCTCCGAGA CGGAGCCGGC GGTACTGCCG
AGCAAGTTTC CCAACCTGCT GGTCAACGGC TCCGCCGGGA TCGCGGTGGG GATGGCGACC
AACATCCCGC CGCACAACCT GCGCGAGGTG ATCAACGCCT GTGTGGCGCT GATTGATGAC
CCGGAGATCT CCATCGAAGG TCTGATGGAG CACGTGCCGG GCCCCGATTT CCCGACGGCC
GGGATCATCA ACGGCGTGGA AGGCGTGCGC GAGGCCTATC GCACTGGTCG TGGCCGGGTG
CTGATCCGGG CGCGCTCGCA TGTCGAGCCG CTGGAGGGCG GACAGCGCGA GGCGATCGTC
GTCACCGAAC TCCCGTACCA GGTGAACAAG GCCCGCCTGA CCGAGAAGAT CGCCGAGCTG
GTCAAGGAAA AGCGCATCGA CGGCATCTCG GAGCTGCGCG ACGAGTCGGA CAAGGACGGC
ATGCGCCTGG TCATCGAGCT CAAGCGCGGC GAGATGGCCG AGGTGGTCCT GAACCACCTG
TACATGCACA CGCAGATGCA GAACGTCTTC GGCATCAACA TCGTCGCCCT GGTTGACGGC
CAGCCGAAGG TGCTGGATCT GCGTCAGGTG CTGGAGTCCT TTCTGCGGCA TCGCCGCGAG
GTGGTTACCC GCCGCACGAT CTTCGACCTG CGCAAGGCGC GCGAGCGCGC CCATATCCTG
GAAGGCCTGG CGATCGCGCT GGCCAACATC GACCCGGTGA TCGAACTGAT CCGTGCCGCC
CCCAACCCGG CCGAGGCCAA GGCCGGCCTG CTGGCGCGCA GCTGGCCGCT GGGCGTGGTC
AGCGACATGC TCGACCGGGC CGGGGCCAGC GCCTCGCGTC CGGAGGATCT GGCAGCGGAC
TACGGCGTGG GCGACGACGG CTATCGCCTG TCCGAGGCCC AGGCGCAGGC GATTCTGGAT
CTGCGCCTGC ACCGCCTGAC CGGGCTGGAA CAGGACAAGA TCCTCGACGA ATACCGCGAG
TTGCTGGACC TGATCGAGGA CCTGCTCGAC ATCCTCGGCT CGGGTGAGCG CCTGCAGCAG
GAGATCCGCA ACGAACTGCT GGCCGTGGCC GAGCAGTTCG GCGACGAACG CCGTAGCGAG
ATCCGCGAGC GCCAGGCGAA CCTCACCCTG GAAGACCTGA TCGGCGAGGA AGACGTCGTG
GTGACGCTCT CCCACGCCGG CTATGTGAAG TACCAGCCGG TGGCCGACTA CCGCGCGCAA
CGCCGAGGCG GTCGCGGCAA GGCGGCCGCG AGCTTCAAGG AAGAGGACTT TGTCGACCGG
TTGCTGGTCG CGAACACGCA CGACACGGTG CTGTGTTTCT CCAGCCGCGG GCGGGTCTAC
TGGCTGAAAG TCTATGAACT GCCACAGGGT TCGCGCGCCT CGCGTGGCAA GCCGATCGTG
AATCTGCTGC CGCTGGAAGC GGACGAGCGA ATCAACGCCA TCCTGCCGGT GCGCGAGTAC
GACCCGGACC ACTATGTGTT CATGGTGACC GCGCGCGGAA CGGTCAAGAA GACCCCGCTG
ACCGACTTCT CGCGCCGCCG CTCGACCGGG ATCATCGCGG TGGATCTGCG CGACGACGAT
TACCTGGTGG ACGTTTCGCT TACCGATGGC CAGATGGACG TAATGCTCGT TACCACGGCC
GGCAAGGCAG TGCGCTTCTC CGAGAACGAC GTGCGGCCGA TGGGCCGTAC CGCCTGCGGT
GTGCGCGGCG TGCGCATGGA ATCGGATCAT CGCGTGATTG CGCTGCTCAA TGTCGCCGAG
GGTGCCGCCT TGCTGGCCAC CGAGAACGGC TACGGCAAGC GGACTCGCTT CGACGAATTC
CCGGTCCACC GTCGTGGCGG CCAGGGCGTG ATCGGGATCC AAACCGAGGG GCGCAACGGG
CCACTGGTCG GGGCCGCGCG CGTGCTGGAA GACGACGAGG CGATGCTGAT CACCACGGGC
GGTACGCTGG TGCGTACACC GGTGGACCAG ATCCCGCTGA TCGGGCGCAA TACGCAGGGT
GTGCGGCTGA TCCGCCTGGA CGAGGGCGAG CGCCTGGTGG AACTGGCCCG GGTCGAAAAG
CTGCAGGGCG AGGATGAAGA CCTGGACGAC GACAGCGACA GCGAGGACGA CGAATCCACG
CAGAACACCA TGGACAACGG AGATCCGGAA TGA
|
|---|
| Protein sequence | MAEFAKEIFP VNLEDEMQQS YLDYAMSVIV GRALPDVRDG LKPVHRRVLY AMRELGNDYN
KPYKKSARVV GDVIGKYHPH GDSAVYDAIV RMAQPFSMRY MLADGQGNFG SIDGDSPAAM
RYTEVRMARI AAELLADIDK ETVDFIDNYD GSETEPAVLP SKFPNLLVNG SAGIAVGMAT
NIPPHNLREV INACVALIDD PEISIEGLME HVPGPDFPTA GIINGVEGVR EAYRTGRGRV
LIRARSHVEP LEGGQREAIV VTELPYQVNK ARLTEKIAEL VKEKRIDGIS ELRDESDKDG
MRLVIELKRG EMAEVVLNHL YMHTQMQNVF GINIVALVDG QPKVLDLRQV LESFLRHRRE
VVTRRTIFDL RKARERAHIL EGLAIALANI DPVIELIRAA PNPAEAKAGL LARSWPLGVV
SDMLDRAGAS ASRPEDLAAD YGVGDDGYRL SEAQAQAILD LRLHRLTGLE QDKILDEYRE
LLDLIEDLLD ILGSGERLQQ EIRNELLAVA EQFGDERRSE IRERQANLTL EDLIGEEDVV
VTLSHAGYVK YQPVADYRAQ RRGGRGKAAA SFKEEDFVDR LLVANTHDTV LCFSSRGRVY
WLKVYELPQG SRASRGKPIV NLLPLEADER INAILPVREY DPDHYVFMVT ARGTVKKTPL
TDFSRRRSTG IIAVDLRDDD YLVDVSLTDG QMDVMLVTTA GKAVRFSEND VRPMGRTACG
VRGVRMESDH RVIALLNVAE GAALLATENG YGKRTRFDEF PVHRRGGQGV IGIQTEGRNG
PLVGAARVLE DDEAMLITTG GTLVRTPVDQ IPLIGRNTQG VRLIRLDEGE RLVELARVEK
LQGEDEDLDD DSDSEDDEST QNTMDNGDPE
|
|---|
| |