Gene TK90_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1179 
Symbol 
ID8806941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1254926 
End bp1256032 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID 
Productresponse regulator receiver modulated CheB methylesterase 
Protein accessionYP_003460424 
Protein GI289208358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.564706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.289977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTAA AGGTACTGGT GGTGGATGAC TCCGGGTTTT TCCGCCGCCG CATCAGTGAA 
ATTCTGGACG CCGACGCGGG GATCGAGGTC GTCGGCAGCG CGGAGAACGG CGAGGAGGCG
ATTCGCAAGG TCAAGGAACT GGACCCGGAT GTCGTGACCA TGGACATCGA GATGCCCGTA
ATGGACGGTA TCACCGCGGT GCGCCGGATC ATGGCCGAGA ACCCTCGGCC GGTACTGATG
TTCTCGAGTC TCACCACCGA GGGAGCCCAG GCGACCCTGG ATGCGCTGGA GGCGGGGGCA
GTCGATTTTC TGCCGAAACG CTTCAGTGAC ATCGCATCCG ACGAGGACAG CGCACGTATG
ATGCTGCGCC GGCGGGTGCG CAGCCTTTCG CGCAGCCGGG CCCGTTCGGT CAGCCAGCCG
GGGAGCGCAC GTCCAGCGGT CGAGGCCCGC CCCTCTGCGC GTCGTGAAGA GTCCGATCGC
AAGGCGGCCG AAGTACAGCG ACAGGCACCG CCGGTCAGTC GGCCCGCCGT GCCGCTGCGG
CAGGTCCGCG CGGTGCTGAT TGGGACGTCC ACCGGAGGCC CGGTGGCCTT GCAGGAGGTG
CTCAAGGCCC TGCCGGCGAA TTTCCCGCAG CCGATTCTGC TGATTCAACA CATGCCTGCG
AGCTTTACGC CGGCCTTTGC GGAGCGCCTG GACGCCATGT GCCAGATTCG GGTCAAGCAG
GCACAAGACG GCGATGTCAT GCGTCCCGGG GTGGCCCTGT TGGCCCCCGG CGGTATGCAA
ACCACGCTGG AGCGCGGCAG CCAGACAACG GTGCGGGTGA CGGAGAGCCC GCTGGGCACG
ATCTACAAGC CCAGCGTGGA TGCGGCGTTC AGCTCGGCGG TCGAGGCCTT GCGCGGACAG
GTGCTGGCCG TGGTGCTGAC CGGGATGGGC GCGGATGGCC GCGAAGGTGC ACGGGCGCTG
AAGGGCGCCG GGGCACAGGT GTGGGCACAG GATGCGGCCA CGTCGGTGGT GTATGGGATG
CCGGCCGCAG TCGCGGAGGC CGGACTCGTG GACCATGTGT ATCCGTTGCC GGATGTGGGC
CCTGCACTGG TCAAGGGGTT TTGCTAG
 
Protein sequence
MPVKVLVVDD SGFFRRRISE ILDADAGIEV VGSAENGEEA IRKVKELDPD VVTMDIEMPV 
MDGITAVRRI MAENPRPVLM FSSLTTEGAQ ATLDALEAGA VDFLPKRFSD IASDEDSARM
MLRRRVRSLS RSRARSVSQP GSARPAVEAR PSARREESDR KAAEVQRQAP PVSRPAVPLR
QVRAVLIGTS TGGPVALQEV LKALPANFPQ PILLIQHMPA SFTPAFAERL DAMCQIRVKQ
AQDGDVMRPG VALLAPGGMQ TTLERGSQTT VRVTESPLGT IYKPSVDAAF SSAVEALRGQ
VLAVVLTGMG ADGREGARAL KGAGAQVWAQ DAATSVVYGM PAAVAEAGLV DHVYPLPDVG
PALVKGFC