Gene TK90_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1171 
Symbol 
ID8806933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1245223 
End bp1246374 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content64% 
IMG OID 
Productflagellar biosynthetic protein FlhB 
Protein accessionYP_003460416 
Protein GI289208350 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.127204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA ACGAGAGCGG ACAAGAGAAA ACCGAACAAC CGACTCCGAA ACGCCTGCGC 
GAGGCGAAGG AGAAGGGCCA GGTCCCGCGT TCGCGGGAGC TGTCGACCTT CCTCGTGCTG
ATGGCGGCCG GAGGGTTCAT GACGTTCTTC GGTCCGACGC TGGGCGGGCA GCTGGCCGAA
CAGACGGCCG GGCGCTTCGA TATCGAGCGT GATCTGGCCT ATGACAGCTC GCTGCTGCTG
CCGTATCTGT CGGAACAGAT TTTCATGACG CTGCGTACGT TGCTGCCCCT TTTCGGGGTG
CTGATGGTCG CGGCGGTGTT GGCGCCCATC CTGATCGGGG GCGCCAACTT CTCCTGGCAG
GCGGCGAAAC CCAAGGCCTC CAAGCTGAAC CCGCTCAAGG GTCTCAAGCG CATCTTTTCG
TGGCAGGGTC TGATGGAGTT TGGCAAGACC TTCGCCAAGT TCGTGCTGGT CGCGGGTGTG
GCGATGTCGG TGTTGTGGAC TTTCTCGGAT CGCCTGCTGA TGCTCGGGTA CGAGCCCCTC
GAGCAGGCGA TCACACATGC GGCGCAGCTG GCGCTGGGGA CCTTCGTTGC GGTCTCGGCC
GCACTGATTC TCGTGGCTGC GATTGACGCT CCGTTCCAGA TGTGGAACCA CCAGAAGCAG
CTGCGCATGA CGCGCCAGGA GCTGAAGGAC GAATACAAGG AGACCGACGG CAAGCCGGAG
GTCAAGCAGA AGATCCGGCA GCTGCAGCAG GAGATGGCGC AGCGCCGGAT GATGGAGGAG
GTGCCGAAGG CGGACGTGGT CATCACCAAT CCGACCCACT ATGCGGTGGC GATCACCTAC
GAGGCCTCGC GCATGGCCGC GCCGAAGCTG GTGGCCAAGG GCGTGGACGA GGTCGCGGCC
TCGATCCGCG CGGTTGCGGA CGAACACAAG ATCATTCGCG TCGAAGCACC CCGGGTGGCC
CGCGCCATCT ACTTCACCAC GGATCTGAAC CAGGAGATCC CGAACGGGTT GTTCGTCGCG
GTCGCGCGCA TCCTCGCCTA CGTCTATCAG CTGAAGCGCT CGGATGCAGA CGTCGCGATG
CCGGATGACC TGCCGGTGCC GGAAGACTAT CTCGATCCGC AGCAGCAGCG CGGCCGTCGG
AGGAACCGCT AA
 
Protein sequence
MAENESGQEK TEQPTPKRLR EAKEKGQVPR SRELSTFLVL MAAGGFMTFF GPTLGGQLAE 
QTAGRFDIER DLAYDSSLLL PYLSEQIFMT LRTLLPLFGV LMVAAVLAPI LIGGANFSWQ
AAKPKASKLN PLKGLKRIFS WQGLMEFGKT FAKFVLVAGV AMSVLWTFSD RLLMLGYEPL
EQAITHAAQL ALGTFVAVSA ALILVAAIDA PFQMWNHQKQ LRMTRQELKD EYKETDGKPE
VKQKIRQLQQ EMAQRRMMEE VPKADVVITN PTHYAVAITY EASRMAAPKL VAKGVDEVAA
SIRAVADEHK IIRVEAPRVA RAIYFTTDLN QEIPNGLFVA VARILAYVYQ LKRSDADVAM
PDDLPVPEDY LDPQQQRGRR RNR