Gene TK90_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1166 
Symbol 
ID8806928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1242338 
End bp1242949 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content63% 
IMG OID 
Productflagellar motor switch protein FliN 
Protein accessionYP_003460411 
Protein GI289208345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.256199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0772727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACA CCGAAGACCA GAAGAAAGAC GACGAGAATC AGGCCTCCGA GGAGGAGGGC 
GATGTAACGA CCGAGGCGAC TGCAGAGACC GACTCGGGTG ACACCGAAGG AGATCAGGAC
GCCCTGGCGG ACGAATGGGC CGCCGCGCTG GCCGAGCAGA AGGATACCGA CGGCGAGCCG
GCCGCCGATC CGGACGAACT GCTGAATCAG GCTCAGGCCA GCAGTAGCGG AAGTGAATCG
GCCGATGCCC TGATGGGGGC GGAGAAAAGG GAACGCAAGC ACAAGCCCGA TCCGGAAGCC
GAACCTCTGA AGCCGGAGGA ACTGGCAGCG TCGGCCGGCA TGTCGGCCGA GGACATTAAT
CTGCAGATGG TGCTGGATGT GCCGGTCACC ATCTCGATGG AGATCGGTCG CAGCCGCATC
CCCATCCGCA ATCTGCTGCA GCTGAATCAG GGGTCGGTGG TGGAGCTCGA CCGGCTCGCG
GGGGAGGCGT TGGATGTGCT CGTGAACGGG ACGCTCATCG CGCATGGCGA GGTGGTCGTG
GTCAACGAGA AGTTCGGCAT ACGGCTGACC GATGTGATCA GCCCAAGTGA ACGCATTCGC
AAGCTCAAGT AA
 
Protein sequence
MADTEDQKKD DENQASEEEG DVTTEATAET DSGDTEGDQD ALADEWAAAL AEQKDTDGEP 
AADPDELLNQ AQASSSGSES ADALMGAEKR ERKHKPDPEA EPLKPEELAA SAGMSAEDIN
LQMVLDVPVT ISMEIGRSRI PIRNLLQLNQ GSVVELDRLA GEALDVLVNG TLIAHGEVVV
VNEKFGIRLT DVISPSERIR KLK