| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1155 |
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| Symbol | |
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| ID | 8806917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1230759 |
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| End bp | 1232180 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003460400 |
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| Protein GI | 289208334 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000091424 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCAAC TCAGTCTACG AGCGGTGGCC GGTATGACGG ATCTGAATGG ACGCAGCCAG
GAACTACGGA TTGCTCTCAC CGGTGAACCA GGCGCTGCCC GCGACACGCA GGCGATTCTG
TCCTGTCTTG GTTGTGAGAC CGAATCCCAT CAATCCGCCG AAGCCCTGAT CGACCAGGGT
TCCGATGCCG CCGCGGTATG GTGGTGCGGC CCGGCCGCGG AGCTGGACCA GCGCCTGTTC
GATGGGCTAA ACGGTCAGAC GACCGTGGTC GTGCAGCCCA CCGATGGCGA GAAGATCAGC
GCCCCGAACT CGGGTTGCGT GGTCGAGCAC CCGTTGTCGA TTGCCCAGGT CAGTCAGGTC
CTGCAGTGGC TGCGGTACGG CCGCGAGCCC GGTCACGACG ACATGCCGGG CCTGGTGGGT
GTGCATCCGA CGATGCTCGC GGTCAAGCGC CTGGTCGCAC AGGTGGCCCG TACCGATGCC
ACGGCGCTGA TTCTGGGCGA GACCGGGTCC GGCAAGGAGG TCATTGCGCG GGCGATCCAC
GCGGCGTCCG ATCGTGCGGA CAAGCCCTTC GTCGCCGTCA ACTGCGGTGC GATCCCGGCG
GATTTGCTCG AAAGCGAGCT GTTCGGGCAC GAGAAGGGGG CCTTTACGGG CGCCTTTACC
GCGCGTACCG GCCGCTTCGA ACTGGCCGGT GACGGGACGC TGTTCCTCGA CGAGATCGGG
GACATGCCTT TGCCGATGCA GGTCAAGCTG CTGCGTGTTC TGCAGGAGCG GGTGTTCGAA
CGCGTCGGTT CGAACAAGTC CATCTCCACC AATGCACGGA TCATCGCCGC TACGCACCGC
AATCTGGATG ACGCGGTGAC CGAGGGCAGT TTCCGTCAGG ATCTGTTTTT CCGGCTCAAC
GTATTCCCGA TCGAACTGCC GCCTCTGCGC GAGCGCGCGA GCGACATCCC CTCGCTGGTG
GCGGCGCTGG AGGACCGGTT GCGAGAGCAG GGCATGACGC CGGCCCATTT GACCCCGGCT
GTGATGGCTC ACCTGAGCCA GCTGCCGTGG AAGGGCAACA TCCGTGAACT GGCGAACCTG
CTCGAGCAGT TGGCCATTAT GTATCCGGAT CTGCCAGTGG ACCTCGGGCA GCTTCCCCCA
CGGGTCCGTC CGGAGGGGAT CGAAGACCTG ACCATGCCAC CGCAGAGCGA TGCGAATGGG
CAGGCCGGCA GCGCGCCGAA CGGGGCATTG GGCCTGGCCC GCGAGGGGTT GCCCCCGGAA
GGCGTAGACC TGCGGGGCTA TCTGAATGAC CTGGAGCGTG AAATGATCGT TACGGCGCTG
AACGAAACCG GACAGGTCGT CGCGCGTGCG GCGCGCCGGC TCGGCATGCG CCGCACCACC
CTGGTCGAGC GTATGCGCAA GTTCGGATTG GGCAAGGCCT GA
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| Protein sequence | MSQLSLRAVA GMTDLNGRSQ ELRIALTGEP GAARDTQAIL SCLGCETESH QSAEALIDQG
SDAAAVWWCG PAAELDQRLF DGLNGQTTVV VQPTDGEKIS APNSGCVVEH PLSIAQVSQV
LQWLRYGREP GHDDMPGLVG VHPTMLAVKR LVAQVARTDA TALILGETGS GKEVIARAIH
AASDRADKPF VAVNCGAIPA DLLESELFGH EKGAFTGAFT ARTGRFELAG DGTLFLDEIG
DMPLPMQVKL LRVLQERVFE RVGSNKSIST NARIIAATHR NLDDAVTEGS FRQDLFFRLN
VFPIELPPLR ERASDIPSLV AALEDRLREQ GMTPAHLTPA VMAHLSQLPW KGNIRELANL
LEQLAIMYPD LPVDLGQLPP RVRPEGIEDL TMPPQSDANG QAGSAPNGAL GLAREGLPPE
GVDLRGYLND LEREMIVTAL NETGQVVARA ARRLGMRRTT LVERMRKFGL GKA
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