| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1134 |
|---|
| Symbol | |
|---|
| ID | 8806894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1207026 |
|---|
| End bp | 1207793 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003460380 |
|---|
| Protein GI | 289208314 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00000411378 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGAG GGCTGGAATG GTTCGCCAAG CGCTTTGCCG GCTTCGAAGA TTGCTACGTG
CTGATCGGCG GGGCAGCGGC TTATCTGGTG CAGGAGGAAG CTGGCCTGGA GCCCCGCGCT
ACGCGGGATC TCGACATCGT GCTGTGCGTG GAGTCGTTGA CTGCCGAGTT CGGACAGCGC
ATGTGGGATT TCATCGAAGA GGGGGGCTAC GAGGTGCGCC AGGCGGGAGA GGCGCCGCGC
ACGTTCTATC GCTTCAGCAA GCCGAGCGAT CCGCATTTCC CGACGATGCT GGAATTTTTC
GCCCGCGAGC CGGGGCATCT TCCGCTCGTC GAGGACAGCC ACCTGACGCC GGTGCCGATT
GACGAGGCGG TAGTCAGCCT GTCGGCTATC CTGCTGGACT CTGACTATTA CACGCTCATC
CACGCCCAAA AGCGCGAGCT TCTGGGGGTG CCGGTGATCA CCGAGTACGC GCTGATCCCG
CTGAAGGCGC GCGCCTGGCT GGACTTGAGC AAGCGCAGGG CCGAGGGTGA GCCCATCGAT
TCCAAGGACG TGAAGAAGCA CCGTAGCGAT ATCCTCCGGC TGTACCGCAT GCTCGTACCA
GGCCAGACGG TTGAACTGCC CGAGACCGCG CGGCGTGATC TGCACGAGTT TCTGGATGCG
CAGCGAGGGC AACTGGATGC GGGTTACCTG AAAACCCTTG ATATCACCGA TGAGAGCGGT
GACGAGATCC TCGATCGACT GGGGCAGATG TTCGGAGTGC AGGTATGA
|
|---|
| Protein sequence | MVRGLEWFAK RFAGFEDCYV LIGGAAAYLV QEEAGLEPRA TRDLDIVLCV ESLTAEFGQR
MWDFIEEGGY EVRQAGEAPR TFYRFSKPSD PHFPTMLEFF AREPGHLPLV EDSHLTPVPI
DEAVVSLSAI LLDSDYYTLI HAQKRELLGV PVITEYALIP LKARAWLDLS KRRAEGEPID
SKDVKKHRSD ILRLYRMLVP GQTVELPETA RRDLHEFLDA QRGQLDAGYL KTLDITDESG
DEILDRLGQM FGVQV
|
|---|
| |