Gene TK90_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1122 
Symbol 
ID8806882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1190311 
End bp1191342 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator-like protein 
Protein accessionYP_003460369 
Protein GI289208303 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.970908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.295057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAG GGCAGGGAAT GCGCGCCACG CTGCAGCGTC GGATGTTATT GCTAGGGATG 
ATCCCGCGGC AGCCCCGTCG AGTGAGCGCA CCGGATCTTG TCGGACGCCT CCAGACACGC
GGGCTCTCCA CCACGCTGCG TACCATCGAA CGGGATCTGG AGGCCCTGTC TGGGTTCCTT
CCGCTGGGTC GGGATGAACG GGACCGCCCG TACGGCTGGT ACTGGCTGTC CGAGGCGCCG
TTGCAGGACG TGCCGGCGAT GGACCCGGAA ACGGCCCTGA CCCTGCAGAT CCTGGACGCG
CATTCCGCAC AACTGCTACC GCCTTCGGCC CGGGCGCGAC TCAAGCCGCA GGCTGCCCGC
GCCCGGGAAG TCCTGGACTC CGCCGGCGAA GCCTCCGGTC TGAGCCTGTG GCCCGAGCGG
GTTCGCATCC TTTCCAACGG TCCGCCGCTC ACTCCGCCCG AGATGCCGGA CGGCGTGTTC
CTGGTCCTGC AGCAGGGCCT GCTGGAACGC CGCTGCCTCG ATATCACCTA CCGTTCCCGT
TCGAAGGGGC AGGTTAAAGA CCACCGGATC CATCCGCTGG CACTCGTGTT CCGCGAGCCG
GTTACCTACT TGCTGGCCAC GATGGAACCG CATCAGGATG TCGTGCATCT GGCGGCCCAC
CGTATCGAGG CCGCGGCCCT GACCGATCAG CCCGCCCGCG ATCCCGAGGG CGGATTCGAC
CTCGACCAGA TCATCCGCAA CGGCGCCTTC GACTATCCCG AGGGTGATGC CATCCCCCTG
GAACTCCGGG TAAATGCGGA CCTTGCCTAC CACCTCCACG AGGCCCGCCT GGCGGAAGAC
CAGGTCATTG AGCGGGGTCC CGACGGCACC TCGCGTGTGA CGGCTACCGT GCGCGACACC
GCCCGGCTCA AGTGGTGGCT CTTGGGTCTG GGGGCGGGCG TCGAGGTCCT TGGACCCCAG
GCACTGCGCG ACGCCATTGC CCAGGAATTG GAATCCGCCC GTCTGGCCTA CCGCACGAAA
GATCCCGCAT GA
 
Protein sequence
MPEGQGMRAT LQRRMLLLGM IPRQPRRVSA PDLVGRLQTR GLSTTLRTIE RDLEALSGFL 
PLGRDERDRP YGWYWLSEAP LQDVPAMDPE TALTLQILDA HSAQLLPPSA RARLKPQAAR
AREVLDSAGE ASGLSLWPER VRILSNGPPL TPPEMPDGVF LVLQQGLLER RCLDITYRSR
SKGQVKDHRI HPLALVFREP VTYLLATMEP HQDVVHLAAH RIEAAALTDQ PARDPEGGFD
LDQIIRNGAF DYPEGDAIPL ELRVNADLAY HLHEARLAED QVIERGPDGT SRVTATVRDT
ARLKWWLLGL GAGVEVLGPQ ALRDAIAQEL ESARLAYRTK DPA