Gene TK90_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1109 
Symbol 
ID8806869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1178578 
End bp1178859 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content60% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003460356 
Protein GI289208290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC ACCGATTCGA CAGCGTGTGG GATGCGATTG AGAACACCCC GGAAGAAGCG 
GAGAACCTGA AGCTGCGTTC CGCTCTGATG AGGGCCCTCA AGGACCATCT CGTTCGCTCG
GAAATGAAAC AGGGCGAGGC CGCGAAACTC TTCGGAGTCA CGCAGCCGCG AGTCTCTGAT
CTGATGCGAG GAAAGATCGA CGTGTTTAGC CTCGATGCCC TGGTGAACAT GGCAGCGGCC
GCCGGCTTGC ACGTTGAGTT GCGGGTCCTC GACGCCGCGT AG
 
Protein sequence
MTEHRFDSVW DAIENTPEEA ENLKLRSALM RALKDHLVRS EMKQGEAAKL FGVTQPRVSD 
LMRGKIDVFS LDALVNMAAA AGLHVELRVL DAA