| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1108 |
|---|
| Symbol | |
|---|
| ID | 8806868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1178237 |
|---|
| End bp | 1178581 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF891 |
|---|
| Protein accession | YP_003460355 |
|---|
| Protein GI | 289208289 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.535364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGTT CAGGCCCCAA GCCAGTCGTG TTCCGAGCGA CGGCACTGGA CGATCTCCGT
GCTTTCCCCT TATCGGCTAG ACGGGAGGCG GGGCACCAGA TCGACCAGGT CCAGCATGGA
AGGGACCCCG ACGACTGGAA GCCGATACAG TCCGTGGGGA AGGGTGTCAG AGAAATCCGG
ATCCGAGACG AGGCCGGAGC ATTTCGGGTC CTCTATGTCG CCAAGTTCGG GGATGCGGTT
TACGTGCTGC ATTGCTTCTG GAAGAAGACA CAAAAGACCC GCAAGAGCGA TCTGGACTTG
GCCGCTCAGC GTTATCGCGA TTTGCTGCAG GAGATAGGCC AATGA
|
|---|
| Protein sequence | MSGSGPKPVV FRATALDDLR AFPLSARREA GHQIDQVQHG RDPDDWKPIQ SVGKGVREIR
IRDEAGAFRV LYVAKFGDAV YVLHCFWKKT QKTRKSDLDL AAQRYRDLLQ EIGQ
|
|---|
| |