| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1095 |
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| Symbol | |
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| ID | 8806855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1159343 |
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| End bp | 1162477 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003460343 |
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| Protein GI | 289208277 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCCA CTACCCCCGA ACCGCCGGAG TACGCCGAGC TTATGGCGGT CAGCAACTTC
TCGTTCCTGC GCGGGGCTTC GCACCCGGAG GAGCTGGTGG AGCGGGCCCG GGCGCTGGGC
TATCGCGCGC TGGCGCTGAC CGATATCGCC TCGCTGGCCG GCGTGGTGCG CGCGCACGCG
GCGGCGAAGG AATGTGGCTT GCACCTGATC CTGGGGGCGA CCTTCCAGCT CGCGGACGGC
CCCGCTCTGA CCCTGCTGGT ACGCAATGCG GCGGGCTACG CCGCGCTGTG CCGCCTGATC
ACTCAGGCGC GCGGGGCAGC GGACAAGGGG CATTACCACC TGACCCGGGC GGACCTCGAC
GTCCTGCCCG CCGAGGCGCG GGCTGGCTGG CACGTCCTGC TGCGTATCGA ACCCGAGCCC
GCAGAACCGG CGCTCGCCGA AGCCGTCCGC TGGCTGGCCG GATGGGCCAC GCCGGGTCAG
GCCCATCTGG CGGTCAGCCA GTTGCGTACG CCGGAGGATG CCACGCTCGC AACCCGCGCA
CGACAGCTCG CCGAGGCGAC GAGACTCCCG ATCGTCGCCT GCGGCGACGT GCACATGCAC
AGCCGGGGCC GGCGTGCGTT GCAGGACGTG CTCACCGCTC TGCGCCAGCG CACCACGGTC
GCCGAGGCGG CCCCGGCGCG CTTCCCCAAC GGCGAGCGCT GCCTGCGCCC GCGCGACGAC
CTGGCCACGT TGTATCCCGC CCCCTGGCTC GCGGCCAGTG TGCGGATCGC GCGGGACTGC
GACTTTTCGC TGGATGCGGT CACCTACCGC TACCCGACCG ATCCCCTGCC CCGGGACACG
AGCCCGGCCG CCTACCTGCG CGAGGAAACC CTCAAGGGGG CACGGGGGCG CTGGCCCGAC
GGCATCCCGC CGAAGGTGAC GGAGCAGATC GAGCGCGAGC TCGGGATCAT CGCGCAGCTT
GGCTACGAGC CCTACTTTCT GACGGTCTAC GACATCGTGC GCTTTGCCCG CGGCCGCGGG
ATCCTGTGCC AGGGGCGCGG CTCGGCGGCG AATTCTGCCG TGTGCTATGC CCTCGGCATT
ACGGCGGTGG ACCCCTCGCG CTCCAGCATG CTGTTCGAGC GCTTCATCTC CGCCGAGCGC
GGCGAGCCAC CGGATATCGA CGTCGACTTC GAGCACGAGC GCCGCGAGGA GGTCATCCAG
TACATCTACC AGCGCTACGG CCGCGAGCGC GCGGCGCTGG CCTGTACCGT GATCCGCTAC
CGCCGCCGCA GCGCCCTGCG CGACGTCGGC CGCGCCCTGG GCATCTCGCG CGCACGACTG
GATGCGCTGA CCGCCAACCT CGCCTGGTGG GACGACGGCA TCCCCGCCGA GCGGCTGCGC
GAGGTCGGGC TGGACCCGGA TGGCGCCCTG GCCCGGCAGT GGCAGGCCCT GACCGCCGAG
CTGCTGGGCT TTCCCCGCCA CCTGTCGCAG CACACCGGCG GCTTCGTGAT CGCCGAGGGC
CGGCTGGACG AGCTGGTGCC GATCGAGAAC GCGGCAATGC CGGAGCGCTC GGTGATCCAG
TGGGACAAGG ACGACCTGGA TGCCGTGGGC CTGTTGAAGA TCGACGTGCT GGCACTGGGC
ATGCTCTCCT GCGTGCGCCG CGCGCTGGAG CTAATGGCCC AGCACCGGGG CCGCGACTGG
GGCCTGGCCG ACGTCCCCGC CGAGGACCCG GCGGTCTATC GCATGCTGCA GAAGGCCGAC
ACCCTGGGCA TATTCCAGAT CGAGTCGCGC GCGCAGATGA GCATGCTGCC CCGCCTGAAA
CCGGCAAACT TCTACGACCT GGTGATCGAG ATCGCCATCG TGCGCCCCGG CCCGATCCAG
GGCGAGATGG TGCACCCGTA CCTGAAGCGC CGCGCCCACC CGGAGCGGGT AAGCTACCCG
AACGCAGAGG TGAAGCGCGT ACTCGGGCGC ACCCTGGGCG TGCCGATCTT CCAGGAACAG
GTGATCGAGC TGGCGATGGT CGCGGCCGGC TTCTCCGCTG GCGAGGCGGA CGGGCTGCGC
CGCGCGATCG GGGCCTGGCG CCGCACCGGC CAGCTCGCGC GCTACCGCGA ACGCTTGATG
GACGGGATGC GGCAACGCGG CTATCCGGAG AAATTCGCCG AGCAGCTGTA CAAGCAGATC
CTCGGCTTTG GCGAGTACGG CTTTCCCGAG TCCCACTCGG CCAGCTTTGC GCTGATCACC
TGGGTCTCGT CCTGGCTCAA GTGCCATGAA CCGGCGATCT TCGCCTGCGC CCTGCTGAAC
AGCCAGCCGA TGGGCTTCTA CGCCCCGGCG CAGATCGTCG CCGATGCGCG CCGCCACGGC
GTGGAGGTGC GCCCGGTGGA TGTGCGCTGC AGTGACTGGG ACTGCACGGT GGAGCCCGTA
GCCGGAAGCG ACGCGCTGGC CCTGCGCCTG GGCCTGAACC GGGTCGGCGG GCTCGCGCAG
GCCGTGGCCG AGCGTGTCGT CGCCGCGCGC GCCGAACGCC CGTTCGCGGA CGTACCGGAT
CTGGTCGCCC GCGCTGCACT CACCCGCGCC CAGGCCAACC GCCTGGCCCG CGCCGACGCC
CTGAAGGGGC TGGCCGGCAA CCGCCACCAG GCGCGCTGGG CGACCGAGGC GGTGGAGGAA
CCCCTGCCCC TGTTCGCCGA CGCCCCGGCC GAGACGGTGC GCGAGGCCGA CGTAACCCCG
CTGCTGCCGG GCCCGGATGC GGTGGACGAC CTGGTGCAGG ACTATGCCAC CCAGGGCCTG
AGCCTGGGCC CGCACCCGCT GGCGCTGATG CGCCCGTTCC TGGAGCAAAG ACGTTTACCC
ACCGCCGCCC GGCTACTGGA ACGCCCCGGG CACCCCGGCG CCCGCTATGC CGGCCTCGTG
ATCACCCGCC AGCGGCCCGG CTCGGCCCAT GGCACGGTAT TCCTGACACT GGAGGACGAA
AGCGGCACGC TGAACCTGAT CGTCTGGCCG GACCGGGTGG AGCGCTTTCG CGCCGAGGTC
CTGCACGGCC GCCTGCTGGA GGCCCACGGC GAGTGGCAGT ACAGCGAGGG GGTCGGCCAC
TTGATCGTGC AGCGCCTGAT CGACCGCAGC GACTGGCTGG GCGAGCTGAC CACCCGCTCC
CGCGACTTCG GCTAG
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| Protein sequence | MDPTTPEPPE YAELMAVSNF SFLRGASHPE ELVERARALG YRALALTDIA SLAGVVRAHA
AAKECGLHLI LGATFQLADG PALTLLVRNA AGYAALCRLI TQARGAADKG HYHLTRADLD
VLPAEARAGW HVLLRIEPEP AEPALAEAVR WLAGWATPGQ AHLAVSQLRT PEDATLATRA
RQLAEATRLP IVACGDVHMH SRGRRALQDV LTALRQRTTV AEAAPARFPN GERCLRPRDD
LATLYPAPWL AASVRIARDC DFSLDAVTYR YPTDPLPRDT SPAAYLREET LKGARGRWPD
GIPPKVTEQI ERELGIIAQL GYEPYFLTVY DIVRFARGRG ILCQGRGSAA NSAVCYALGI
TAVDPSRSSM LFERFISAER GEPPDIDVDF EHERREEVIQ YIYQRYGRER AALACTVIRY
RRRSALRDVG RALGISRARL DALTANLAWW DDGIPAERLR EVGLDPDGAL ARQWQALTAE
LLGFPRHLSQ HTGGFVIAEG RLDELVPIEN AAMPERSVIQ WDKDDLDAVG LLKIDVLALG
MLSCVRRALE LMAQHRGRDW GLADVPAEDP AVYRMLQKAD TLGIFQIESR AQMSMLPRLK
PANFYDLVIE IAIVRPGPIQ GEMVHPYLKR RAHPERVSYP NAEVKRVLGR TLGVPIFQEQ
VIELAMVAAG FSAGEADGLR RAIGAWRRTG QLARYRERLM DGMRQRGYPE KFAEQLYKQI
LGFGEYGFPE SHSASFALIT WVSSWLKCHE PAIFACALLN SQPMGFYAPA QIVADARRHG
VEVRPVDVRC SDWDCTVEPV AGSDALALRL GLNRVGGLAQ AVAERVVAAR AERPFADVPD
LVARAALTRA QANRLARADA LKGLAGNRHQ ARWATEAVEE PLPLFADAPA ETVREADVTP
LLPGPDAVDD LVQDYATQGL SLGPHPLALM RPFLEQRRLP TAARLLERPG HPGARYAGLV
ITRQRPGSAH GTVFLTLEDE SGTLNLIVWP DRVERFRAEV LHGRLLEAHG EWQYSEGVGH
LIVQRLIDRS DWLGELTTRS RDFG
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