| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1091 |
|---|
| Symbol | |
|---|
| ID | 8806851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1154234 |
|---|
| End bp | 1155508 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | diguanylate cyclase with PAS/PAC sensor |
|---|
| Protein accession | YP_003460339 |
|---|
| Protein GI | 289208273 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCACTG TCGCGTACAT CGAGGGGTTC GAGAAACTCC GGCTGCTGGA TGCAGCCATC
GACCAGTCGC GCCACTCCGT CCTGATCACG GACGCGGACC TCGACGACGG GCCGCGCATT
GTCTACGTGA ATGCTGGATT CGAGCAGATG ACGGGATACG CGGCGGACGA GGTGCTGGGC
GAGACCCCGC GCCTGCTGCA GGGCCCGCGG ACATCACGGG TAATCCTCGA CCGCCTGCGC
GCTGCACTCA GTGCAGGCGA GACCTTCGAT GGCGAGGTCA TCAACTATCG CAAGGATGGC
AGCACGTACG TGGTGCGCTC GTATATCTCC CCCGTGTATG CCGAGGAGGC GCCCGAGCGG
GTCACCCACT ATGTGTCCCT GCAACAGGAC GTGACGGACG AACGGGCACG CGATGAGCAG
CTAAGGCTGT TGTCGACGGC GGTTGAAGTG TCCGGGGACC CGGTGCTGAT TACTGATCCT
GAAGGCACGA TCACCTACGT CAATGCCGCG TTCGAGGAGC TGATGGGCTA CTCGCGCAGC
GAGGTGCTGG GCGAGAATCC CCGGCGCTTC AAGTCGGGCC GCCAGGATGA CGCGTTCTAT
CAAGGGATGT GGCGGGCACT GGAGCGCGGC GAGAGCTTCC GGGGCGAATT CCTGAATCGG
CGCCGCGATG GTTCCCTGAT CCACCTGGAG CAGACCATCA CCCCGGTGCT CGATGACCAC
GGCAAAATCT CGCATTACGT CGCCCTGGGC AAGGATGTGA CCGACCGGCT GCGCATGGAA
GACGAGATTC GCCGGGTGGC GCATACCGAC TGGCTGACCG GCGTCGCGAA TCGGCTAAGC
CTCGGGAACA CGCTGGAGGC GGAGATCGAG CGCAGCCAGC GCTATGGTCG TCCGCTGAGC
CTGATCATGT TCGATCTGGA TCACTTCAAG GCCGTAAATG ATCAGTACGG GCACGAGGCG
GGTGACGAGG TCCTCAAGGC GCTGGCGCAA ACGGTGAGCG CGGAGCTGCG CGACGCGGAC
ACCCTGGGTC GCTGGGGTGG CGAGGAGTTC ATCATCGTGG TGCCCGAGAC GCGACTGGTC
GGGGCGACGG CCCTGGCCGA GAAACTGCGC CAGGCCGTCT CCACCATGAG CGTGCCCGGG
GTGCCCGGTG TGACGGCGAG CTTCGGGGTC GCCGAACTCG CCTCCGGCGA CAGCGCGAAG
CTCCTCGCGC GGCGCGCGGA CGAGGCCATG TACCAGGCGA AGCAGGCAGG GCGTGATCGG
GTCGTGGCCC TGTAG
|
|---|
| Protein sequence | MATVAYIEGF EKLRLLDAAI DQSRHSVLIT DADLDDGPRI VYVNAGFEQM TGYAADEVLG
ETPRLLQGPR TSRVILDRLR AALSAGETFD GEVINYRKDG STYVVRSYIS PVYAEEAPER
VTHYVSLQQD VTDERARDEQ LRLLSTAVEV SGDPVLITDP EGTITYVNAA FEELMGYSRS
EVLGENPRRF KSGRQDDAFY QGMWRALERG ESFRGEFLNR RRDGSLIHLE QTITPVLDDH
GKISHYVALG KDVTDRLRME DEIRRVAHTD WLTGVANRLS LGNTLEAEIE RSQRYGRPLS
LIMFDLDHFK AVNDQYGHEA GDEVLKALAQ TVSAELRDAD TLGRWGGEEF IIVVPETRLV
GATALAEKLR QAVSTMSVPG VPGVTASFGV AELASGDSAK LLARRADEAM YQAKQAGRDR
VVAL
|
|---|
| |