| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1070 |
|---|
| Symbol | |
|---|
| ID | 8806829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1130329 |
|---|
| End bp | 1131234 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | HPP family protein |
|---|
| Protein accession | YP_003460318 |
|---|
| Protein GI | 289208252 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.496114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACAG GACGCGGCCT CCTACTCGGC GACTTCCTCG ACACCACCAA TCACAAGGAC
AAGCTGATCG CCCTGATCGG CGCCGTGGTC GGGCTGTATC TGTCACTGGA GGTCGCGGCC
TCGGTCACCG AAAGCGGCAT CAACGGACTC ATCCTGGCCT CGCTGGGCGC TACCGCCGTG
CTGCTCTTCG CCGCACCTCG GGCCGCGCTG TCGCAGCCCT GGAATGTCCT TGGCGGGCAT
GCCATTGCCG CCATTGTCGG AGTCGCCGTC CGGCAGGCGG TAGACCACCC GCTGTTGGCC
GCCGCGCTCG CGGTCGGCCT CACCGTCTAC GCGATGTACT ACCTGCGCTG CCTGCACCCA
CCCGGGGGCG CCACAGCGCT GTATGCCGTG GTCGGCGGGG CGTCGGTCGA GGAACTCGGC
CTGCTGTTCA TCCTGCACCC CGTGCTGTCC AGCGTGGCCG TCATGCTGAT GGTCGCCATA
GTGATCAACT ACCCTTTTCC ATGGCGTCGC TACCCGGCGG CCCTGGCGCG CCTGGACGAG
CCCTCACCCG CCGGCCCATC CGGTGCACTG GAACGTGCGG GCTTGAGCCA GGCGGACCTG
GAGCACGCGA TGCGCGATCT CAATCTGTAT CTCGACATGA CCGAGGACGA CCTGGCCCGC
CTCTATCTGC TGGCACGACG CCACCATGAG CACCCGGACG CGATCAATCC TGCGGATATT
CGACCCGGAC AGTGCTACAG CAACGGCGCC CAGGACCACG CCTGGAGCGT GCGCAAGGTC
CTGGCGCGGG ATGCCGACCT GATCACGTAT CGCGTCATCA GCGGCGCGGG CGTTCCCGAG
GAAGGCCGCT GCTCCGTGAC GGACTTTGTT GCCTGGGCAC ACCATCGCCT GGACGCTCCA
GGGTGA
|
|---|
| Protein sequence | MRTGRGLLLG DFLDTTNHKD KLIALIGAVV GLYLSLEVAA SVTESGINGL ILASLGATAV
LLFAAPRAAL SQPWNVLGGH AIAAIVGVAV RQAVDHPLLA AALAVGLTVY AMYYLRCLHP
PGGATALYAV VGGASVEELG LLFILHPVLS SVAVMLMVAI VINYPFPWRR YPAALARLDE
PSPAGPSGAL ERAGLSQADL EHAMRDLNLY LDMTEDDLAR LYLLARRHHE HPDAINPADI
RPGQCYSNGA QDHAWSVRKV LARDADLITY RVISGAGVPE EGRCSVTDFV AWAHHRLDAP
G
|
|---|
| |