| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1052 |
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| Symbol | |
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| ID | 8806810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1111829 |
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| End bp | 1114030 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_003460300 |
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| Protein GI | 289208234 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATT CGCTACTCAC CAACACCGAG CTGCAGGGCC TGGACCGCGA CCCGCTGGTC
GCGCGCTTTG CCGGGCCCAA CGGCGATGCC GCGTCCGCAG CCGCGCTCGC GGATGCGCTG
GACCTGGCGC TCACCTCGGT GGATGCCTCC GGCCTGGAGT CTCATCCGCT GGACGTGGCC
GAGGTCCTGC GTCACCTGAA CGTCGACCGG CAGACCATCA CCGCCGCGCT CCTGGTCAGC
GCCTATCTGG CTCGACAGAT CGACGAGCGC GCCCTCAAGG AACGCTTCGG CGACTCGATT
GCGCGCCTGA CCGTCAACGT CGCGGCCCTG GTCAGCCGCA GGTTCGAGGC CCCGGTCGGG
CGCCCGGAAC AGGCCGAACG CCTGCGCCGC ATGTTGATGG CGATGGTCGA CGACGTTCGC
GCGGTACTGA TCAAGCTCGC CTACCGGGTG CAGCATCTGC GCCTGGCCGT GAAGGAACCA
GACGACGGCG CCCGCGTGCT CGCACAGGAG ACCCTGGACG TGATCGCCCC GCTGGCGAAC
CGCCTGGGGG TGGGCCAGTT GAAATGGGAG ATGGAAGACC TCGCCCTGCG CATCCTCGAA
CCCGAGACCT ACCGCGAGAT CGCCAAGGGA CTGGAGGAGA ACCGCACCGA ACGCGAGGCC
TATGTCGAGC GCTTCGCCCA TACCCTCCAC GACCGGCTGG CCGAAGCCGG CATCCAGGCG
CGTGTGTTCG GGCGGCCCAA GCACATCTAC AGCATCTGGA AGAAGATGCA GCGCAAGCAG
ACCTCGCTGG ACGAGCTCTA CGACCTGCGT GCCACGCGGG TAATCGTTGA CGAACTCGCC
ACCTGCTACA CCGTGCTCGG CATCGTGCAT AACGACTGGC GCCACCTGCC CAGCGAGTTC
GACGACTACA TCGCCAACCC CAAGGACAAC GGCTACCAGT CGCTGCACAC CGCCGTGGTC
GGCCCCGAGG GCAAGGTCGT CGAGGTGCAG ATCCGCACCC GCGAAATGGA CGACTTCGCC
GAACTCGGGG TCGCCGCGCA CTGGCGCTAC AAGGAGGGGG GACGCGAGGA TCAGGCACTC
AACCGCGCGA TCAGCAGCCT GCGCCAGTTA CTGGAGGCCG CCGACAACTC CGACCAGAAC
CTGCTCGACG AAATCCAGAG CGAGCCACTG CATCAGCGCG TATTCGTGCT CACGCCCCAG
GGCGAGGTGA TGGACCTGAC CCAGGGCGCC ACGCCGCTGG ACTTCGCCTA CGCCGTGCAC
ACCGAGGTCG GTCACCGCTG CCGGGGTGCC AAGGTGGACG GGCACATCGT CCCGCTGACC
TACAAGCTGA AGTCCGGCGA ACGCGTCGAG GTGCTCACCA CCCGCGAGGG CGGCCCCAGC
CGCGACTGGC TCAACCCCAA TCTCGGCTAC CTGAACACCG CCCGCGCCCG CTCCAAGGTG
CGCACCTGGT TCCGCCAGCA GCACCAGGAC GAACACCTGG CCACCGGCAA GCACCTGCTC
GACCGCGAAT GCCAGCGCCT GGGCTGTGGT TCGAACCTGG ACCGCAACGC GCTCGCCGAC
GCCATGAAGT TCCAGACCTT CGACGAGCTG CTGATCGCGC TCGGTGCCGG CGACATCACC
ACCAGCCAGA TCGCCGGTCG CATCTCCCAC CAGCTGCGCG AACAACGCCA GGCGGAAAAG
GCCCGCGCCA AACAGGCCGC CCCGCCCCAA CCCGCGGAAC CACGCCGGGA AGAACGCATC
CAGGACGACG AGATCCGCAT CCGCGGCGTC GGTGGCCTGC TGACCTCCCG CGCGCGCTGC
TGCAACCCGC AGCCGGGCGA CGCGATCGTC GGCTTCATCA CGCGCGGGGC CGGCGTCTCC
GTCCACCGCA GCGACTGCGT CAACATCCTG CGCATGCCGG AGGAAAAACG CGGCCGCCTG
ATCCCCGTCT CCTGGGGCGA CGAGCCCGAG CGCGAACCCA TCACCCTCGA GCTCGAAGCG
CACGACCGCG CCGGCCTGCT GGGCGAAGTC GGCAATGCCT TCTCCGCCAG CGGCATCAAC
CTGCTGCGCG TGAACACCCG AACCGACCCC AACGACCGCA GCGTCCACAT GGAACTCGAA
GCCGAGATCA CCGACCTCGG CGAACTCAGC ACCCTCTTCG ACCGCCTGCA ATCCCTCGGC
AGCGTCCAGT CCGTGCGCCG CATCCCCAAC CGCTCAACCT GA
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| Protein sequence | MRHSLLTNTE LQGLDRDPLV ARFAGPNGDA ASAAALADAL DLALTSVDAS GLESHPLDVA
EVLRHLNVDR QTITAALLVS AYLARQIDER ALKERFGDSI ARLTVNVAAL VSRRFEAPVG
RPEQAERLRR MLMAMVDDVR AVLIKLAYRV QHLRLAVKEP DDGARVLAQE TLDVIAPLAN
RLGVGQLKWE MEDLALRILE PETYREIAKG LEENRTEREA YVERFAHTLH DRLAEAGIQA
RVFGRPKHIY SIWKKMQRKQ TSLDELYDLR ATRVIVDELA TCYTVLGIVH NDWRHLPSEF
DDYIANPKDN GYQSLHTAVV GPEGKVVEVQ IRTREMDDFA ELGVAAHWRY KEGGREDQAL
NRAISSLRQL LEAADNSDQN LLDEIQSEPL HQRVFVLTPQ GEVMDLTQGA TPLDFAYAVH
TEVGHRCRGA KVDGHIVPLT YKLKSGERVE VLTTREGGPS RDWLNPNLGY LNTARARSKV
RTWFRQQHQD EHLATGKHLL DRECQRLGCG SNLDRNALAD AMKFQTFDEL LIALGAGDIT
TSQIAGRISH QLREQRQAEK ARAKQAAPPQ PAEPRREERI QDDEIRIRGV GGLLTSRARC
CNPQPGDAIV GFITRGAGVS VHRSDCVNIL RMPEEKRGRL IPVSWGDEPE REPITLELEA
HDRAGLLGEV GNAFSASGIN LLRVNTRTDP NDRSVHMELE AEITDLGELS TLFDRLQSLG
SVQSVRRIPN RST
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