Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1046 |
Symbol | |
ID | 8806804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1105229 |
End bp | 1107112 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003460294 |
Protein GI | 289208228 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.835563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAT CCCCCTCCTT CGCCGAACTC GGCCTGTCCG AGTCGTTGGC CCGTGCCCTG TTGCAACTGG GCTTCACCAC CCCGACCCCG GTCCAGGCCG CGTGCATCCC GGCCCTGCTG GCCGGCGACG ACGTGCTGGG CGAGGCCCAG ACCGGCACCG GCAAGACCGG CGCCTTCGGC CTGCCGCTGA TCGACTCGAT CGATCCCGCG CAGCGTCGCG TGCAGGCGCT GATCCTCGCG CCGACCCGCG AGCTGGCCGG CCAGGTCGCC ACTGCCCTGG AGGGCTTCGC GGCCAGCATC GACGGGCTCG AGATCCTGCC GGTCTACGGC GGCCAGCCGA TGGGCGTGCA GATCCGCGCC CTGCGCGATG GTGCGCAGGT CGTGGTCGGG ACGCCCGGCC GCGTGGTTGA CCACATCAAG CGCGGCACGC TGACACTGGA TGCGCTGCGC ATGGTGGTGC TGGACGAGGC CGACGAGATG CTGCGCATGG GCTTTGTGGA GGAGATCGAA TGGATCCTCG AACAGACCCC GGCCGAGCGC CAGACCACGC TGTTCTCCGC GACCATGCCG GCACCGATCC GCCGTATCGC GCACCGCCAC ATGCGCGAGC CGCAGGAAAT CCGCATTGGC GCGGGCAACG AGGCCGGCAC CGACATCGAC CAGAGCTACT GCCTGGTCGA CCAGCGCCAC AAGACCGAGG CCCTGGGCCG GATGATCGAG GTGGAAGCGG GACTGGACGC AGCGATCGTG TTTGCCCGTA CCAAGGCCGC GACCGCGGAG ATCGCCGAGG CCCTGAATGC CCAGGGCGTG CAGTCCTCCC CGCTTAATGG CGACATGGAA CAGGGCGAGC GCGAGCGCGT AGTCGCCGAC CTGCGCGATG GCCGTCTGGA CGTGATCGTG GCCACCGACG TGGCCGCCCG CGGCATCGAT GTCCCGCGCA TCACCCATGT CTTCAACTAC GACGCCCCGG GCGATGCCGA GGTGTACGTG CACCGCATCG GCCGCACCGG CCGCGCCGGA CGCAAGGGCC GTGCGATCCT GTTCCTGGAG CCGCGCAAGC GGCGCATGCT GCGCGATATC GAACGCCTGA CCGGCAAGCC CGTGCGCGAG CAGAAGGTCC CGGATCGCGC CGCCGTGATC GCCCGCCGCG AGGAGCGCCT GGCCGAACGC CTGCAGGCCG AGCTGGCCGG CGAAGCATCG CCACAGCTCG ACGCCCTGCT GGACCGACTG CTGGCCAACG GCCAGATGGG CGAACGCGAT CTCGCCCGCG CCCTGCTCGC CCTGGCAACC CAGGGCACGC CGCTGGATGG CACGCCCAAC GCGCACGACC CGGTGACGGC GGCCGCCAGC CGACCCGAGC GCGACAGTCA TCGTGCGGAT CGCAACCGTG ACCGCGCCCC CCGCCCCAGC CGCGGCAAGG ACCGTGGGCC GGAAGCGGAC ATGGTGCGCT ACTACATGCC GGTCGGTCGC AATCACGGCA TCGCGCCCGG CGCGATTGTC GGCGCGCTGG CCAACGAGGG TGGCCTGAAC GGCCGCGACA TCGGCCGGAT CGGCCTGCAG GACGACCACA GCCATGTGGA CCTGCCGGCC GCGCTGGACG AGGCCGCAGT GCGCCGACTG GGCAATATCC ATGTCGCCAA CCGTCGCCTG GAGATGGCGC GCTCCGTGCC GACCCGGGAC TCGCGTGCGA CCGAGCGCCA CGCCCCGGCC GCGCGCAAGC CCCGTGGTCC CGGCAAGCCG GCCGCCAAGC GGCGCGGCCC GGCCCCGGCC AACGGCAAGC GCCCGGCCTA TGCGGCTGCC GGAAAGCCGC GCAAGGCGCC GAGCCGCAAG GCCGCCGACA GCCGCGGTGA CGGCACCCTG TCGGTCAAGC GCCGCTCCGC CTGA
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Protein sequence | MSESPSFAEL GLSESLARAL LQLGFTTPTP VQAACIPALL AGDDVLGEAQ TGTGKTGAFG LPLIDSIDPA QRRVQALILA PTRELAGQVA TALEGFAASI DGLEILPVYG GQPMGVQIRA LRDGAQVVVG TPGRVVDHIK RGTLTLDALR MVVLDEADEM LRMGFVEEIE WILEQTPAER QTTLFSATMP APIRRIAHRH MREPQEIRIG AGNEAGTDID QSYCLVDQRH KTEALGRMIE VEAGLDAAIV FARTKAATAE IAEALNAQGV QSSPLNGDME QGERERVVAD LRDGRLDVIV ATDVAARGID VPRITHVFNY DAPGDAEVYV HRIGRTGRAG RKGRAILFLE PRKRRMLRDI ERLTGKPVRE QKVPDRAAVI ARREERLAER LQAELAGEAS PQLDALLDRL LANGQMGERD LARALLALAT QGTPLDGTPN AHDPVTAAAS RPERDSHRAD RNRDRAPRPS RGKDRGPEAD MVRYYMPVGR NHGIAPGAIV GALANEGGLN GRDIGRIGLQ DDHSHVDLPA ALDEAAVRRL GNIHVANRRL EMARSVPTRD SRATERHAPA ARKPRGPGKP AAKRRGPAPA NGKRPAYAAA GKPRKAPSRK AADSRGDGTL SVKRRSA
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