Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1043 |
Symbol | |
ID | 8806801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1102895 |
End bp | 1103602 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | Hydroxyacylglutathione hydrolase |
Protein accession | YP_003460291 |
Protein GI | 289208225 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGCA ACGACCTGCC CTACCGCATC CACCGCCAGG AACTCGGCCC GATGGAAAAC TTTGTCTACC TGATCGAGGA CATGGCCAGC CGTCGCGCGG CCGTGGTGGA CCCGGCCTGG GAACCGGATG CGATCCTCAG CCAGGCGCGC GAGAAGGACG TGACCATCTC CGACATCCTG CTGACCCACA GCCACCACGA TCACATCAAC GGCGTCGAGG CGATCCTGGA GCAGTACCCG AATGCCCGGC TGCATATCCT CAAGCCCGAG GCCGAGTTCT GGGGCAAGGA GCTGGAGCGC CCGCAACTCC ACCACGGCGG CGACACGATG AAGCTGGGCG ACACCGAGAT CCGCTTCCTG CACACGCCCG GCCACACCCC CGGCTCCGCC TGCTTCCACA TGCCGGCCGG CGACGACCTG ATTACCGGTG ACACGCTGTT TGTGTTCGGC TGCGGCCGCT GCGACCTCTC CGGGGGCGAC CCGGAGCAGA TGTTCCATAC GCTGAACGGG CTGCGCGAAG GCCTCCCGGC GCATACCTGC ATCCACCCGG GACACAACTA CGCAGAGAAG GCCGAATCCA CCCTGGCGGA ACAGGACGAG TGCAACCCGT TCCTGCACTT CCAGGACAAG GACGAATTCG TCCACTACCG CATGAACGAA CACGACCGGG TGCGCTCCAC GCCCTACCAT CCCATCCCGC GCGGCTGA
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Protein sequence | MDRNDLPYRI HRQELGPMEN FVYLIEDMAS RRAAVVDPAW EPDAILSQAR EKDVTISDIL LTHSHHDHIN GVEAILEQYP NARLHILKPE AEFWGKELER PQLHHGGDTM KLGDTEIRFL HTPGHTPGSA CFHMPAGDDL ITGDTLFVFG CGRCDLSGGD PEQMFHTLNG LREGLPAHTC IHPGHNYAEK AESTLAEQDE CNPFLHFQDK DEFVHYRMNE HDRVRSTPYH PIPRG
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