Gene TK90_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1040 
Symbol 
ID8806797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1100840 
End bp1101568 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content71% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003460288 
Protein GI289208222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.852746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGGGC TCCCGGCCCT GTCGGTCATC ATCCCGGCCT GGAACGAGGC GCAGTGGCTG 
CCGCACACCC TGGCGGCGCT GCGGCAGGCC CTCGCCGACG TGGATCGACG AACCGAGATC
ATCGTCGTCG ACAATGCCTC CACGGATTCC ACTCCGCAGA TCGCGCAGCA GGCCGGTTGC
CGGGTCGTGT TCGAGCCGGA GCGGCGCATC AGCCGCGCCC GCAACGCGGG TGCCCGGGCC
GCCTGTGGCG ACTACCTGCT GTTCGTCGAT GCCGACACCT GGCCCGACGC CGACCTGATC
CGCGCGACAC TCGACGCCCT GGACAGCGGC GCGGTCTGTG GCGGCGGAGC CCGCGTCGCG
TTCGATCACC TGACCCATCG CATCTACCGC TGGGGCGCGG CGGCCTGGAA CACCCTGTCG
GCACGGCTGG GACTCGCCGC CGGCTGCTAC GTCTTCTGCA CCCGCGAGGC CTTCGAGGCA
GTCGGGGGGT TCAGCGAGCG GGTCTATGCG GGCGAGGAAG TGTTCCTGTC GCGAGCGATG
GCGCGCTGGG GCCGCCAGCA CGAGCAGCGG TTCCGGATGC TGGAGACACC CGTGATGACC
TCGGGGCGCA AGGCGGACTG GTTCAGCCCC GCCCAGCACA TCCTGGTAGT GCTACAGGCC
CTGCTGCTGC CCTGGAGCCT GCGCTCGCGC CGGCTGGCCT GGTTCTGGTA CACGCGCCCG
AAGGGATGA
 
Protein sequence
MRGLPALSVI IPAWNEAQWL PHTLAALRQA LADVDRRTEI IVVDNASTDS TPQIAQQAGC 
RVVFEPERRI SRARNAGARA ACGDYLLFVD ADTWPDADLI RATLDALDSG AVCGGGARVA
FDHLTHRIYR WGAAAWNTLS ARLGLAAGCY VFCTREAFEA VGGFSERVYA GEEVFLSRAM
ARWGRQHEQR FRMLETPVMT SGRKADWFSP AQHILVVLQA LLLPWSLRSR RLAWFWYTRP
KG