Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1028 |
Symbol | |
ID | 8806785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1090764 |
End bp | 1092089 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003460279 |
Protein GI | 289208213 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0361604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCTG TTTCTTCTTT TGCCGACCTT GGGTTGGCCG AATCCCTTTT GCGTGCGCTG GACCAGGCCG GTTACAAGAC GCCGACCCCG ATCCAGGCCC AGGCGATCCC GGAAGTTCTT AAAGGCGGGG ATCTGCTGGC CGCCGCGCAG ACCGGGACCG GCAAGACCGC CGGCTTTACC CTGCCGATCC TGCAGCGACT GACCACCGGG CAAACGCCCG AGCGCAAGCC GGGGCGTCCG CGGGCACTGA TCCTGACGCC GACGCGCGAG CTGGCTGCTC AGGTCCACGA TTCCGTCCGT ACCTATGGCC GCCACCTGTC GCTGAAGTCG ATGACCATCT TTGGTGGCGT GAACATGAAT CCGCAGATCA AGGCACTGCG GGGCCCCATG GATATCGTCG TGGCGACCCC GGGTCGCCTG CTGGACCATG CTGGCCAGAA GACGATCGAC CTCTCCGGCG TGGAGATCCT GGTGCTGGAT GAGGCCGATC GCATGCTGGA CATGGGCTTC ATCCGCGACA TTCGTCGTCT GATTGGCCTG ATGCCCAAGC AGCGTCAGAA CCTGATGTTC TCGGCGACCT TCTCCGGCGA GATCCGCACA CTGGCGTCGA GCCTGCTGAA CAAGCCGGCC GAGGTCGACG TGGCCCCGCG CAACACCGCC GCCGAGACCG TGCAGCAGAC CGTGCATCTG GTGGAGAGCA GCCGAAAGCG CGAGCTGCTG AGCCACCTGA TCCGCAGCAA CGACTGGGGC CAGGTGCTGG TGTTTACCCG TACCAAACAC GGCGCCAATC GCCTGGCACA GAAGCTGACG CAGGATGGCG TGCCCTCCGA GGCGATCCAT GGCAACAAGA GCCAGGCGGC CCGTACCAAG GCGCTCAAGC AGTTCAAGAC CGGGGCCGTT CCGGTCCTGG TCGCGACGGA CATCGCGGCG CGCGGCCTGG ACATCGACCA GTTGCCGCAG GTGGTCAACT TCGAGCTGCC AAATGTGCCG GAAGACTACG TACACCGCAT CGGCCGCACC GGTCGTGCCG GTTCCGTTGG TGCCGCCCTG TCGCTGGTGG ATGGTGAAGA GATGAAGCTC CTGAAGGGCA TCGAACGCCT GATTCAGCGC CCGATCGAGC GCATCGAAAC CGATGGCTTC GCGACCCCGA AGCCGGCGGC CAACGATGGC AATGGCCAAC GCCGTGGCGG CAAGCCGGGC GGTGGTGCGC GTAATGGCAA GCCGCGCCAG AGCCGTGGCG GCAAGCCCGG CGGCAAGCCC GGCGGCAATC GCGGTGGCGG TCAGGGCCGC GCGGCCCAGG GCAACCGGGC TGCACGCAGC CGCTAG
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Protein sequence | MSSVSSFADL GLAESLLRAL DQAGYKTPTP IQAQAIPEVL KGGDLLAAAQ TGTGKTAGFT LPILQRLTTG QTPERKPGRP RALILTPTRE LAAQVHDSVR TYGRHLSLKS MTIFGGVNMN PQIKALRGPM DIVVATPGRL LDHAGQKTID LSGVEILVLD EADRMLDMGF IRDIRRLIGL MPKQRQNLMF SATFSGEIRT LASSLLNKPA EVDVAPRNTA AETVQQTVHL VESSRKRELL SHLIRSNDWG QVLVFTRTKH GANRLAQKLT QDGVPSEAIH GNKSQAARTK ALKQFKTGAV PVLVATDIAA RGLDIDQLPQ VVNFELPNVP EDYVHRIGRT GRAGSVGAAL SLVDGEEMKL LKGIERLIQR PIERIETDGF ATPKPAANDG NGQRRGGKPG GGARNGKPRQ SRGGKPGGKP GGNRGGGQGR AAQGNRAARS R
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