Gene TK90_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1027 
Symbol 
ID8806784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1087760 
End bp1090288 
Gene Length2529 bp 
Protein Length842 aa 
Translation table11 
GC content64% 
IMG OID 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_003460278 
Protein GI289208212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0664928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC TTCCCCGCTC CCCGGCTCTA CCCCATATGC CCCTGATGTG GCTGACATTG 
CTGGCACTGT TCATGCTGCC CGCGCTCCTC TGGATGGTCG GCATCCCCGT CCCGCCTCTG
GTCCCGCTGG AGCACATGAC CGCGTTCCAC ACGGCCACCG AACTGTTCGC GGTGGTCGTG
GCAATCGGCG TGTTCGCGGT CGCCTATCAC GTGCGCGACC GCCGTCGGCT GATGGCCACT
CTGGTCCTCG CCACAGCGTT TCTGGCGGTT GGCCTGCTCG ATTTCCTGCA CCTGATGACC
TATCCGCAGA TGCCGGATTT CATCACTCCC AACTCCTCGC AGCAGACGAT CTTTTTCTGG
CTGGCCGCGC GGCTCGTCGG CGCGCTGGCT CTTCTGCTCT ACGTAGCACT TCCCCTGGTC
CCGAGAAGCC AGGGACCCGC TCCCAGAGGC ATGCTGGCGG GTGCGTTGGT ACTTGTTGCG
TTGCTTGCCT GGGTAGGGCT GTGGCATGAG CAGCGCATCC CGGCACTGTT CATCCCGGGC
GAGGGACTGA CGCCGTTCAA GATCGCGCTG GAGGGCGTGG TGGTGGCACT GCATGCGGCC
ACCCTGGTGA TCCTGCTACT GCGCCCGCAG CTCATGCAGC GCCCGGGCAT GCCGCTGGTG
GCCGCCGCGC TGATGATCCT GATGGCCAGC GAGGTGTTCT TTACCCTGTA CGACAACCTG
TCCGACGGCT TCTTCGTACT CGGCCATATC TACAAGGTGG CGGCCTATGC GCTGATTTAC
TGGGCCGTAT TCATCGAAAG CGTGCGAGCG CCCATGGCCC AGCTGAGGGC TGCCCACCGG
GATATCGAGC TGCGCCAGCA GCGCTACGAG CAACTGATCG ACACGGCGCC GGACGGGGTG
CTGGTGACCG ACGGCGGCGG CACCATCCTG ATGGCGAATC GCAACCTCGA ACGGCTGTTC
GGGTACCCGC GACGGCATCT GATTGGCCAG CCCGTGGAGA ACCTGATCCC CGAGCGCCTG
CGCGAACACC ACCGATCGGT CCGCTTGCAG CAGGGCGACA ACATCTCGGA ACGCACCATG
GGCCAAATAC CCGACCTGCG GGGACGTCGG CTGGACGGTA CCGAGTTTCC AGTCGACATC
AGCCTGAATG CCTTCGAGGA CCAGGGCGGG CGGCGCATCA CCGCCTTTAT CCGTGACATT
ACGGACCGCC AGCGCCGCGA GGCCCGTATC CAGCACCAGG CGACTCATGA CAGCCTGACC
GGCCTGCCCA ACCGCTGGCT CCTGCACGAT CGGCTTGCCC AGAGTATTGC CCATGCCAGC
CGGCACGAAC ACCGCATTGC GGTGATGCTG CTCGATCTCG ACCACTTCAA GATGATCAAC
GACACCTTCG GGCACCACGA GGGTGACGAA CTGCTGCGCG AAGTGGCGCA GCGCCTGAAG
GACGCAGCGG GCACCGACGC CACGATCGGG CGTTTTGGCG GCGACGAGTT CATGATCCTG
CTCCCCGAGA TTACGGATGA ACTGCAGGTC GGAGAGCGCG GCCAGGAGAT CCTGGCGCAG
TTCGACCGGC CGTTTCACAC CGGCCCCACG CGCCAATTCA GCTCCAGTGC CAGTCTCGGG
ATCGCGCTGT TCCCGCAGGA TGCGCGGGAC GCGAACACCC TGGTGCGCTA TGCCGACATG
GCGATGTACG AAGCGAAGCG GTCCGGGCGC AACACCTACG CATTCTATTC CGAACACCTG
GATGCCCAGG TACGTGCGGA ACAGCAGCTC CAGGAGCGAC TGAAACACGC ACTGGAGCAC
GACCAGCTGG CACTCCACTT CCAGCCGTTG ATCGATGCCC ACTCCGGGGC CGTTACCGCC
GCCGAGGCCC TGCTCCGCTG GAACGATCCG GAACTGGGTG CCGTACCACC ATCGCGCTTT
ATCCCCAGCG CCGAGGCGAA CGGGTTGATT CTGCCGCTCG GCGACTGGGT GATCCGTCGC
GCCTGCCAGC AACTGGCCGA CTGGGCACAA CTGGATGTCG ACACCTCCAT TTGCATCAAT
GTCTCGGCGC TTCAGTTCCG ACAGCCGGAT CTCGTCTCCC GACTCGCTGC GGCCCTGAAG
GAGGCCGGCG CTTCGCCCGA ACATCTAGAG ATCGAGGTGA CCGAGACCGT GGCCATGGCC
GATGTCGCCC TGACGCGCGA GCACCTCTCC GGGCTCAAGG CCCTCGGTGT GCGCGTATCG
CTGGATGATT TCGGCACCGG GTATTCTTCG CTCGCCTATC TGAAGTCGTT GCCGATCGAC
AAGATCAAGA TTGACCGCTC GTTCATCGCG GGGATCGGCC ACGACCGCGA CGCCGAGATG
ATTCTGCGTT CGGTGATGGG CCTCGGTCAC AGCCTGCATT TGAAGCTGGT GGCAGAAGGC
GTCGAGACAG CCGAGCAGCT CGCCTTTCTG CGCAGAGAAG GCTGCGACCT GTACCAGGGC
TGGTTCTATT CGCCCGCGCT TTCGGTGGAG GAGTTCCGTG CCACGGTCCA CTCGCAACTG
GATGCCTGA
 
Protein sequence
MNALPRSPAL PHMPLMWLTL LALFMLPALL WMVGIPVPPL VPLEHMTAFH TATELFAVVV 
AIGVFAVAYH VRDRRRLMAT LVLATAFLAV GLLDFLHLMT YPQMPDFITP NSSQQTIFFW
LAARLVGALA LLLYVALPLV PRSQGPAPRG MLAGALVLVA LLAWVGLWHE QRIPALFIPG
EGLTPFKIAL EGVVVALHAA TLVILLLRPQ LMQRPGMPLV AAALMILMAS EVFFTLYDNL
SDGFFVLGHI YKVAAYALIY WAVFIESVRA PMAQLRAAHR DIELRQQRYE QLIDTAPDGV
LVTDGGGTIL MANRNLERLF GYPRRHLIGQ PVENLIPERL REHHRSVRLQ QGDNISERTM
GQIPDLRGRR LDGTEFPVDI SLNAFEDQGG RRITAFIRDI TDRQRREARI QHQATHDSLT
GLPNRWLLHD RLAQSIAHAS RHEHRIAVML LDLDHFKMIN DTFGHHEGDE LLREVAQRLK
DAAGTDATIG RFGGDEFMIL LPEITDELQV GERGQEILAQ FDRPFHTGPT RQFSSSASLG
IALFPQDARD ANTLVRYADM AMYEAKRSGR NTYAFYSEHL DAQVRAEQQL QERLKHALEH
DQLALHFQPL IDAHSGAVTA AEALLRWNDP ELGAVPPSRF IPSAEANGLI LPLGDWVIRR
ACQQLADWAQ LDVDTSICIN VSALQFRQPD LVSRLAAALK EAGASPEHLE IEVTETVAMA
DVALTREHLS GLKALGVRVS LDDFGTGYSS LAYLKSLPID KIKIDRSFIA GIGHDRDAEM
ILRSVMGLGH SLHLKLVAEG VETAEQLAFL RREGCDLYQG WFYSPALSVE EFRATVHSQL
DA