| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1024 |
|---|
| Symbol | |
|---|
| ID | 8806781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1083913 |
|---|
| End bp | 1084560 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | ERCC4 domain protein |
|---|
| Protein accession | YP_003460275 |
|---|
| Protein GI | 289208209 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGT TGCATCTCCC GATCCGCGTG GATCGCCGCG AACAGGGCAA GATCATCCAG
CGCCTCGAGC GCCTGGAGGG CGTGGAGCTG GAGTTCGTCG ATCTTGATGT CGGCGACTAC
GAACTCCCCG GTGGGGTCGT CGTGGAGCGC AAGTCCGCCA CCGACATGGT GCTGAGCGTC
GTGGACCAGA CCCTGTGGGA GAACGCCGCC AAGCTTAAGG CGACGCACGA CAAGGTGATC
TACGTAGTCG AGGGGGACCT CTACGAACCA CGCTTCCACC AGCAGGCGCT GGACATCCAC
CGCGCCCTGA CGCATCTGAC GATCGCGCTC GGGATCAGTG TGCTGCCCTC CAATGACGAA
GACACCAGCG GCATGCTGAT CTACCTGCTA GGCATGAACG CCCAGGTGGA CCCCGACCCA
ATCGCACGCC CCGCCAAGCC CGAAAAGCGC CGTGCAGCGG CGGAGTTCAT TATCAGCGGC
CTGCCCGGTG TGGAACCCGA TCTGGCCCGC GACCTGCTGC GCCAGTTCGG CAGCGTGCGC
GACGTGCTGA ACACGGATGC CGAGCAACTA GCCGAGGTCG ATGGCATGGA CCTGGAACGC
GCCCAGCGCA TCGAGTCCGT CGTGACCCAT GGCAGCCGCA AAGGGTAA
|
|---|
| Protein sequence | MSQLHLPIRV DRREQGKIIQ RLERLEGVEL EFVDLDVGDY ELPGGVVVER KSATDMVLSV
VDQTLWENAA KLKATHDKVI YVVEGDLYEP RFHQQALDIH RALTHLTIAL GISVLPSNDE
DTSGMLIYLL GMNAQVDPDP IARPAKPEKR RAAAEFIISG LPGVEPDLAR DLLRQFGSVR
DVLNTDAEQL AEVDGMDLER AQRIESVVTH GSRKG
|
|---|
| |