| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0947 |
|---|
| Symbol | |
|---|
| ID | 8806703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1004738 |
|---|
| End bp | 1005319 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | Superoxide dismutase |
|---|
| Protein accession | YP_003460198 |
|---|
| Protein GI | 289208132 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.367199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0414637 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTACG AACTGCCCGA TCTGCCCTAT GCCAAGAACG CGCTGGAGCC GCACATCTCC
GCCGAGACGC TGGAATACCA TCACGACAAG CACCACGCGA CCTACGTGAC CAAGCTGAAC
GGCCTTCTGC CCGGCTCCGA GTTCGAGAAT GCCTCGCTGG AGGACATCAT CAAGAAGGCT
CCGGCCGGCG GCATCTTCAA CAACGGCGCC CAGGTCTGGA ACCACACCTT CTACTTCAAC
TGCATGGGCC CGGACGCCGG TGGCGAACCG TCCGGCAAGG TGGCCGACGC GATCAACAGT
GCCTTTGGCT CGTTTGATGG CTTCAAGGAG AAGTTCAACG AGGCCGCGGT CGGCAATTTC
GGCTCCGGCT GGACCTGGCT GGTGCAAAAT AGCGACGGCT CGGTGGAGAT CGTAAACACC
TCCAACGCCG CCAACCCGAT GCGGGATGGC AAGACCCCGC TGCTGACCTG CGATGTCTGG
GAACACGCCT ACTACATCGA CTACCGCAAC GCGCGGCCGA AGTATCTGGA AAACTTCTGG
AACGTGGTGA ACTGGGATTT CGTCGCCCAG CAGATGAAAT AA
|
|---|
| Protein sequence | MAYELPDLPY AKNALEPHIS AETLEYHHDK HHATYVTKLN GLLPGSEFEN ASLEDIIKKA
PAGGIFNNGA QVWNHTFYFN CMGPDAGGEP SGKVADAINS AFGSFDGFKE KFNEAAVGNF
GSGWTWLVQN SDGSVEIVNT SNAANPMRDG KTPLLTCDVW EHAYYIDYRN ARPKYLENFW
NVVNWDFVAQ QMK
|
|---|
| |