| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0944 |
|---|
| Symbol | |
|---|
| ID | 8806700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1000384 |
|---|
| End bp | 1002456 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Polyphosphate kinase |
|---|
| Protein accession | YP_003460195 |
|---|
| Protein GI | 289208129 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.135403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.090034 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGATG CCGACGTGAC CGATACCGAG CTCTTTCTCA ACCGCGAGCT GTCACTGCTG
GAATTCAACC GGCGCGTGCT GGAACTGGCA CGCGACCCGG GCTTTCCCCT GCTCGAACGC
TTGCGCTACC TGAGCATCTC GTCCACCAAC CTCGACGAGT TCTTCGAGGT ACGCGTGGGA
TCTCTGCGTC AGCAGATCGA CCTGAACGTC CAGACCCCCG GGCCGGACGG CCTCTCGGCG
GCGGAGCAGC TGCGCCAGAT CGCGCCCCGC GCGCATGCGC TGGTCGACGA TCAGTACCGC
ACCCTGAATG ACGAACTGAT CCCGGCGATG GCCGCCGAAG GTATCCATTT CGTGCGTCGA
TCGCACTGGA ACGAGCAGCA AAAGGCCTGG GTGCGCCAGT TTTTCCGCGA GCAACTACAG
CCGGTGCTGA GCCCGATCGG GCTCGATCCC GCACACCCCT TTCCGCGCAT CCTGAACAAG
AGCCTGAATT TCATCGTCAC GCTGAAAGGC AAGGATGCAT TCGGCCGCGA GTCCGGGCGC
GCGGTGGTCC AGGCCCCGCG GTCACTGCCG CGTCTGGTCC ACCTCCCGCG CGAGGTGGCC
AGTGGCGATT CCGATTTCGT GCTGCTTTCG TCCATCCTGC ACGCCCATGT CGACGAACTG
TTCAAGGGCA TGAAGGTTAC CGGCTGCTAC CAGTTCCGGC TGACCCGCAA CTCCGATCTG
TTCGTGCAGG AGGAAGAGAT CGATGACCTC CTGAACGCCC TGGAGGGCGA ACTGCCCCAG
CGCAACTATG GCGCCGGGGT GCGCCTGGAA GTTGCGGACA ACTGTCCGGA CGAGGTCGCG
CAGTTCCTGC TGCAGGAATT CCACCTGGAG GCGGACGACC TCTACCAGGT CACCGGTCTC
GTCAATCTGA ACCGCATGAT GGCGGTGTAC GACCTGGTCG ACCGGCCCGA CCTCAAGTTC
CCCCCGTTCG TCCCCTCCCT GCCACGCCCG GATGCCAGCG GCGACAGTAT CTTCGCCTCC
ATTCGCGCGC ACGACCTGCT GCTGCATCAC CCCTACCAGT CGTTCATGCC AGTGGTGGAT
TTTCTGCGCC AGGCCGCCAG CGACCCCCGC GTGCTGGCGA TCAAGCAGAC GCTTTACCGC
ACAGGTACCC AGTCCCCGCT GGTGGAGACC CTGATCGAGG CGGCGCAGTC GGGAAAGGAG
GTGACGGTGG TCATCGAGCT GCGCGCCCGT TTTGACGAGG CGGACAACAT CGAGCTGGCC
AACCGGATGC AGGACGCGGG CGTGCATGTC ACCTATGGCG TGGTGGGTTA CAAGACGCAC
GCGAAACTCG CCCTCGTGGT GCGCCGCAAT GGGGACAAGC TGGTGCGCTA CGCGCATCTG
GGCACTGGCA ACTACCACTC GGGAACCGCC AAGGCCTACA CCGATTACGG CCTGCTCACG
GCCGACCCGG TACTGACCGA AGACGTGCAC CGCGTATTCC AGCAGCTGAC GGGACTGGGC
AAGGTGGAAC GCCTGCGCGA GCTCATCCAG GCCCCCTTCC GCCTGCACGA TGCCATGTGC
GAGAAGATCG AGCGCGAAGC GGAAAACGCG CGCGAAGGCC GTCCGGCGCG GATCGTCGCC
CGCATGAACT CCCTGAACGA GGCGCGTATC ATCCAGGCGC TTTATCGCGC ATCACAGGCT
GGGGTCCGTA TCCAGTTGAT CGTGCGCGGT ATCTGCAGCC TGCGCCCGGG GGTTCCAGGC
ATCTCCGAGA ACATCGAAGT GCGTTCGGTA CTGGGCCGCT TTCTGGAGCA CTCGCGGGTG
TTCTATTTCG AAAACGGCGG CGAGCCCGAA CTGTATCTGT CCAGCGCCGA CTGGATGCCC
CGCAATTTCT TTCGCCGGGT CGAGGTCGCC TTTCCGATAC GCGATACCGC CATGCGCGAC
CGAGTCGCCG AAGAGTCGCT GTTCAACTAC CTGCGGGACA CCGCCAGCGC CTGGACGCTA
CAGGCCGACG GCAGTTACCG ACGGGTCGAA CCGGCCGCGG ACGAGCCCCC CCATTCTGCC
CAGCAGGAAC TCCTCCACAC CCTCGCTAGC TGA
|
|---|
| Protein sequence | MPDADVTDTE LFLNRELSLL EFNRRVLELA RDPGFPLLER LRYLSISSTN LDEFFEVRVG
SLRQQIDLNV QTPGPDGLSA AEQLRQIAPR AHALVDDQYR TLNDELIPAM AAEGIHFVRR
SHWNEQQKAW VRQFFREQLQ PVLSPIGLDP AHPFPRILNK SLNFIVTLKG KDAFGRESGR
AVVQAPRSLP RLVHLPREVA SGDSDFVLLS SILHAHVDEL FKGMKVTGCY QFRLTRNSDL
FVQEEEIDDL LNALEGELPQ RNYGAGVRLE VADNCPDEVA QFLLQEFHLE ADDLYQVTGL
VNLNRMMAVY DLVDRPDLKF PPFVPSLPRP DASGDSIFAS IRAHDLLLHH PYQSFMPVVD
FLRQAASDPR VLAIKQTLYR TGTQSPLVET LIEAAQSGKE VTVVIELRAR FDEADNIELA
NRMQDAGVHV TYGVVGYKTH AKLALVVRRN GDKLVRYAHL GTGNYHSGTA KAYTDYGLLT
ADPVLTEDVH RVFQQLTGLG KVERLRELIQ APFRLHDAMC EKIEREAENA REGRPARIVA
RMNSLNEARI IQALYRASQA GVRIQLIVRG ICSLRPGVPG ISENIEVRSV LGRFLEHSRV
FYFENGGEPE LYLSSADWMP RNFFRRVEVA FPIRDTAMRD RVAEESLFNY LRDTASAWTL
QADGSYRRVE PAADEPPHSA QQELLHTLAS
|
|---|
| |