Gene TK90_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0935 
Symbol 
ID8806691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp990525 
End bp992447 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content64% 
IMG OID 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_003460186 
Protein GI289208120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.789193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.776781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCT CCGGCATTGG GACCTCCGCA CTGCTGGCGT TTCAGCGCGC GATCGGCACG 
ACCAGCAACA ACATCGCCAA CTCCGCGACC GAGGGCTACA GCCGTCAGCG CACCGAGCTC
GGCAACCTGA GCCCGCAGTT CCTGGGCGGT TCCTATCAGG GCCAGGGTGT GGGCGTGGAT
GCGATCCGCC GCATCTCCGA TGACTTCGTC AACACTCAGC TGCGCACGAG CATCTCCGGG
CAGTCCAATG CGCAGGCGAA GGCGGACCTG GCCGGGCGCA TCGACAATCT GCTGGCAGAT
GACGCCAGTG GCCTGGCCCC CGTGCTGCAG GGCTTCTTCG ATGCCGCCTC CGACGTGGCC
AACGATCCGA CCTCCAATGC GGCGCGTACC GTGTTCCTGA CCGAGGCGGA ATCGCTGGCG
GAGCGCTTCA AGGCGATCGA CGGGCGCCTT GAGGAACAGC GTCGTATCGT GAACGGGCAG
ATCGAGACCA ACGTCAAAGA GATCAACCAG CTGGCCGAAT CCCTGGCCGG GCTCAACCGC
GAGATCGTTG CCAAGAGCAC CCAGGGCACG CCGAACGATC TGCTGGATCA GCGCGACCGT
GTGCTGAATC AACTGGCGGA GAAGGTCGAC CTGACCACGG TCGAGCAGGA CGACGGCGCG
CTGAATGTGT TCATTGGGAA TGGTCAGGCG CTGGTGCTGG GCGGAACCAG CCAGTCGCTG
GTGGCGGATT CCTTCTCCGG CGATCCCGGC AAGCTTGAGG TCGGGATTCA GTCGGGTAGC
GGTGTGGCGA ACATCACGCG CTTCCTGCAG GGGGGCGAAC TCGGCGGCTT GCTGGAGATG
CGCGACTCGG TCATCGACAC CGCACAGAAC ACCCTGGGCC AGATCGCGAT CCAGCTCGGG
CAGGCTTCCA ATGACCAGAA CGCCCAGGGC CTGGACGCCG ACGGGCAGAT CGGCGGTGAC
ATCTTCGGGA TTGGCTCGCC TGCGGTTTGG GGTCGCTCCA GCAACAGCAC AGGTGATGTA
CCCGAGGTGA GCTTTGGCAA TGTCGACGAG TTGACGACAT CGGACTATCG CCTGCGGGTC
ACCGACGATG GCGACTTTCA GCTCGTGCGC CTGTCCAACA ATCAGGTCGT CGCAGAACTC
GACCCGGATG ATGGGGATAC CCTCGAGGCC GATGGCCTGG TCGTGGACAT CAGCGAGTTG
GATGATGCCG AGGCGGGCGA CAACTGGCTG ATCCAGCCGA CGCGCAATGG CGCACGCGAT
CTCGACGTCG TCCTGGATGA CCCCTCGGGT ATCGCGGCGG CGGGCGCTTC CCTGCAGGCA
TCCGCTGCTG ACGGGAATGG CGGCGATGCA ACGATCGAAG GAATCCAGGT TACGGGGGAC
GCCTTTGATC CTGCCGTTCT GGATGATCCG ATCACGGTGA CGGTTGTGGA GGACGGCGGT
GACCTCTTCT ACGAGGTCAA TGGCGAACAG TTTCCGGTGA ATGATGATGG CCCAACTGTT
ATCGAGCTGG ATGGCTGGGA ATTGACGTTG CAAGGGACGC CGGAGGAAGG CGATGAATTT
GTCGTCGAAC TGGATCGTGA CCGCCCTGGC GATAACCGCA ACATGCTCGA GATGGCCGAC
CTGTCCGAGG CGCGCACGAT CGAGACGGAT AATGGCGATC GGCGGGTCCC CGGTTTTGGC
GATGCCTACA ACAGCCTGAT CGCGAACGTT GGGACGCGCA CGCGCCAGGC CAACGTGGCG
CTGGATTCGG CGAATGCCCA GCTGGAGCAG GCCAAGGCCC AGCGCGAGTC GATCTCGGGC
GTGAACCTGG ACGAAGAAGC CGCCGACCTG ATCCGTTACC AGCAGGCCTA TCAGGCCGCC
GCCCAAGTGA TTCAGGTCAG CAACTCGCTG TTCGACAGCC TGCTCGGCGC GTTCCGCCGC
TAG
 
Protein sequence
MSVSGIGTSA LLAFQRAIGT TSNNIANSAT EGYSRQRTEL GNLSPQFLGG SYQGQGVGVD 
AIRRISDDFV NTQLRTSISG QSNAQAKADL AGRIDNLLAD DASGLAPVLQ GFFDAASDVA
NDPTSNAART VFLTEAESLA ERFKAIDGRL EEQRRIVNGQ IETNVKEINQ LAESLAGLNR
EIVAKSTQGT PNDLLDQRDR VLNQLAEKVD LTTVEQDDGA LNVFIGNGQA LVLGGTSQSL
VADSFSGDPG KLEVGIQSGS GVANITRFLQ GGELGGLLEM RDSVIDTAQN TLGQIAIQLG
QASNDQNAQG LDADGQIGGD IFGIGSPAVW GRSSNSTGDV PEVSFGNVDE LTTSDYRLRV
TDDGDFQLVR LSNNQVVAEL DPDDGDTLEA DGLVVDISEL DDAEAGDNWL IQPTRNGARD
LDVVLDDPSG IAAAGASLQA SAADGNGGDA TIEGIQVTGD AFDPAVLDDP ITVTVVEDGG
DLFYEVNGEQ FPVNDDGPTV IELDGWELTL QGTPEEGDEF VVELDRDRPG DNRNMLEMAD
LSEARTIETD NGDRRVPGFG DAYNSLIANV GTRTRQANVA LDSANAQLEQ AKAQRESISG
VNLDEEAADL IRYQQAYQAA AQVIQVSNSL FDSLLGAFRR