Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0902 |
Symbol | |
ID | 8806657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 962453 |
End bp | 963175 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | monofunctional biosynthetic peptidoglycan transglycosylase |
Protein accession | YP_003460153 |
Protein GI | 289208087 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCGTC AACAGCGCGG ACTCATCGCA CCCCTCCTGA GCGCGCTGGC CTGGCTGCTG GCCGGGGCGC TTGCTCTTGT GATTACCGTC GCACTCGGGC TGATTGTCCT GTTCGCCAAG GTCAACCCGC CTTATGGTAT GGCCATGGTG GTCGCCACGG ACTGGCAGAC CGCCTCGCGC CTGCGCCCGG AATGGCAGCG ACTGGATGAT CTGCCACGCC ACTTGATGCT CGCGGTGATC GCGGCGGAAG ACCAGAACTT CCCCGTGCAT CGCGGTTTCG ACTGGGGATC CATGCGTCAG GCCGTGGATG ACCACATGCT GCGGGGACAG CGCCTGCGCG GGGCCAGTAC GATCAGTCAG CAAACGGCCA AGAACCTCTT TCTGTGGCAC GAAAGATCCT GGATGCGCAA GACACTGGAA GCGGGCCTGA CCGCGGGCAT GGAGACCGTC TGGCCCAAGC GACGCATCCT CGAGGTGTAC CTGAACCTGG CGGAATGGGG CCCCGGCATC TACGGCATCG AGCACGCGGC CCAGCACTAC TTTGGCGTCC CGGCGCGCGA GCTGGACCGC CACCAGGCTG CACGCCTGGC CGCGATCCTG CCCAGCCCCG GTGCCTACAA CCCGGTGCAC CCGGGACCGC GGCTGACCCA GCGCATCGCC TGGATCGAAC GCCAGATGAA TCAGCTGGGG ATCGCCTGGC TGGATCCCAT GCTGCTGGAA TAG
|
Protein sequence | MARQQRGLIA PLLSALAWLL AGALALVITV ALGLIVLFAK VNPPYGMAMV VATDWQTASR LRPEWQRLDD LPRHLMLAVI AAEDQNFPVH RGFDWGSMRQ AVDDHMLRGQ RLRGASTISQ QTAKNLFLWH ERSWMRKTLE AGLTAGMETV WPKRRILEVY LNLAEWGPGI YGIEHAAQHY FGVPARELDR HQAARLAAIL PSPGAYNPVH PGPRLTQRIA WIERQMNQLG IAWLDPMLLE
|
| |