Gene TK90_0902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0902 
Symbol 
ID8806657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp962453 
End bp963175 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_003460153 
Protein GI289208087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTC AACAGCGCGG ACTCATCGCA CCCCTCCTGA GCGCGCTGGC CTGGCTGCTG 
GCCGGGGCGC TTGCTCTTGT GATTACCGTC GCACTCGGGC TGATTGTCCT GTTCGCCAAG
GTCAACCCGC CTTATGGTAT GGCCATGGTG GTCGCCACGG ACTGGCAGAC CGCCTCGCGC
CTGCGCCCGG AATGGCAGCG ACTGGATGAT CTGCCACGCC ACTTGATGCT CGCGGTGATC
GCGGCGGAAG ACCAGAACTT CCCCGTGCAT CGCGGTTTCG ACTGGGGATC CATGCGTCAG
GCCGTGGATG ACCACATGCT GCGGGGACAG CGCCTGCGCG GGGCCAGTAC GATCAGTCAG
CAAACGGCCA AGAACCTCTT TCTGTGGCAC GAAAGATCCT GGATGCGCAA GACACTGGAA
GCGGGCCTGA CCGCGGGCAT GGAGACCGTC TGGCCCAAGC GACGCATCCT CGAGGTGTAC
CTGAACCTGG CGGAATGGGG CCCCGGCATC TACGGCATCG AGCACGCGGC CCAGCACTAC
TTTGGCGTCC CGGCGCGCGA GCTGGACCGC CACCAGGCTG CACGCCTGGC CGCGATCCTG
CCCAGCCCCG GTGCCTACAA CCCGGTGCAC CCGGGACCGC GGCTGACCCA GCGCATCGCC
TGGATCGAAC GCCAGATGAA TCAGCTGGGG ATCGCCTGGC TGGATCCCAT GCTGCTGGAA
TAG
 
Protein sequence
MARQQRGLIA PLLSALAWLL AGALALVITV ALGLIVLFAK VNPPYGMAMV VATDWQTASR 
LRPEWQRLDD LPRHLMLAVI AAEDQNFPVH RGFDWGSMRQ AVDDHMLRGQ RLRGASTISQ
QTAKNLFLWH ERSWMRKTLE AGLTAGMETV WPKRRILEVY LNLAEWGPGI YGIEHAAQHY
FGVPARELDR HQAARLAAIL PSPGAYNPVH PGPRLTQRIA WIERQMNQLG IAWLDPMLLE