| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0901 |
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| Symbol | |
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| ID | 8806656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 960019 |
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| End bp | 962319 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003460152 |
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| Protein GI | 289208086 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCCCA GCCGCTTTTT GCGTCTCCCC ATCTTCCTCC TCCTGACCCT CTTCTTGCTG
TCGCTGCTCA TGCCCCTGGG GACCGTTCAG GCCCAGGAGG GCGGTGACGG ACGCGATCTG
CATGACGCGC TGATCGAGGC ACTGGAAAAC GAAGAGGCAC GCGAGCGCCT GCTCGAGACA
TTGCGTGCCG AACGGACCGG GAACGACGAA AGCACGGCAG ACGAGGCGGC CGTCGACACC
GACGAGCCGA TGTCGATCCC GCGCCAGATC GCCCAGGTCA CACAATCGCT CGCAGAAGGC
ACGGTGCAGG AGATTCGGGC GCTGAACGAG ATCGCCACGG ACATTGGCGA ACAGATGCGC
ACGATCGATC TAGTGGTGTT TGGCGCCGGC GTGCTGGACC TGGCGATCCT GATTGTGCTG
ACGGTTGCCG GCTTTCTGAT TCTGCGACGC CTGGGCCACC CGATGTTCGC CGCCCTGGAT
CGCTGGGTGA TTCACTCACC GAGGCAGTAT CACCTGCTGC GTGCGCTTCC GGCGGTCCTG
CTGGCGGCGC TGATCGACTT TCTGGTCGTC CTTCTGGCCT GGGTGGGGGG CTATGGGCTC
GCACTCTTTG TCCTCGGGGA ATCCGGCGAG ATGCTCATGC GGCATTCGTT GTTCCTCAAT
GCCTTCCTGC TGATCGAAGT GACCAAAGCG GCGTTGCGTC TAATTTTCGC GACGCGCTAT
CACGGCCTGC GACTGCTGCC GATGGCCGGC GACGAGGCCG CGTACTGGAA TGCCTGGCTG
GCACGCCTGG TGACCTACAT CGGTTACGGC CTGCTTCTGC TGGTACCGAT CACCAACAAT
CACATCTCCA GCGAGGCCGG CCGTTCGCTC GGCCTGCTGG TGATGCTGAC CGCCTTCCTC
TATGCAGCGG TCATCATCCT GCAGAACCGA CACCGGGTGC ACGACCGCCT GATCCTGGTC
GCTAACCGCG CCGGCTTTGC GTTTACGCGC ATGACCCTGA CCTTTCTGGC GAATGCCTGG
CACTGGATCG CGCTGATCTA CTTCCTGACG CTTGCGGTCG TCAGCATTAC CCGGCCGGAG
GATGCCCTTC CCTTCATGGC GAAGGCCACC GGACAGACCG TACTGGCGGC CTTCATCGGG
GTATTCGTCG CCAACGTGCT CACCCAGATC ATCGGACGCG AGATTCGCGT CCCGGACGAG
ACGCGCGTCA AGTTCCCGCT GCTCGAGGCG CGCCTGAACT CCTATATCCC CAAGGCACTC
AAGACCATGC GTCTGGTGAT CCTGCTGATC GTGCTCGCGG TCATCGCGGA TGCCTGGGGC
ATCTTCAACC TCGCCGACTG GATCGCATCC GACACGGGTA TGTATGTCCT CGGCACTGCG
ATCTCGGTCG CCCTGATCCT GCTCGGCGCA CTGGCCATCT GGCTGGTGTT CGCCAGCTGG
ATCGAACACC GCCTGAGCCC GAGTACCGGC GAAGGCGAGC CGGGCGCGCG CGAGAAGACC
CTGCTGACCC TGTTCCGCAA CGCGGTCGCT GTGGTGCTGG CGGTGATGAC CACCATGATC
GTGCTGGCCG AGATTGGCGT GAACATCGGC CCGCTGCTGG CCGGTGCCGG TGTCCTGGGC
CTCGCCGTTG GCTTTGGCGC GCAAAAACTG GTGCAGGACA TCATCACGGG CGTATTCATC
CAGCTTGAAA AGGCCATCAA TACCGGGGAC GTGGTCACGG TGGCGGGACT GACCGGGGTG
GTCGAAAAAC TCACCATCCG TTCCATGGGC CTGCGTGACT TGTCCGGCAC CTATCACCTG
ATCCCGTTCT CGTCGGTGGA TGCCGTGTCC AACTACATGC GCGAGTTCGC CTACCATGTG
GGCGAGTACC GCGTGGCCTA TCGCGAGGAC ATCGACGAGG TCATCGTGCG CCTGCGCGAG
GCTTTCGAGG AACTCAAGGA AGATCCGGAT CAGGGCCCGA ACATCCTCGA CGAGATCGAG
GTGCACGGCG TCACTGCACT GGCCGACAGC TCGGTCAACG TGCGCATCCG CATCAAGACC
CTGCCGGGCA CGCAGTTCGG GCTGGGCCGC GCGTTCAACC GCCTGGTGAA AAAGCACTTC
GACGCGGCCG GCATCGAGAT CCCGTTCCCG CACCAGACGA TCTACTTCGG TCAGGAAAAG
GACGGGACCG CCCCGCCCGC GCATCTGCGG CTCACGCAGG AAACGGGCGA AGACACCGAG
GACGGTCGGG ACTACTCGAA AGACCGGCGC GCACGCCCCA ATCCGAAACA CAAGGGCGAT
TACGACGAGG CCGACGACTG A
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| Protein sequence | MSPSRFLRLP IFLLLTLFLL SLLMPLGTVQ AQEGGDGRDL HDALIEALEN EEARERLLET
LRAERTGNDE STADEAAVDT DEPMSIPRQI AQVTQSLAEG TVQEIRALNE IATDIGEQMR
TIDLVVFGAG VLDLAILIVL TVAGFLILRR LGHPMFAALD RWVIHSPRQY HLLRALPAVL
LAALIDFLVV LLAWVGGYGL ALFVLGESGE MLMRHSLFLN AFLLIEVTKA ALRLIFATRY
HGLRLLPMAG DEAAYWNAWL ARLVTYIGYG LLLLVPITNN HISSEAGRSL GLLVMLTAFL
YAAVIILQNR HRVHDRLILV ANRAGFAFTR MTLTFLANAW HWIALIYFLT LAVVSITRPE
DALPFMAKAT GQTVLAAFIG VFVANVLTQI IGREIRVPDE TRVKFPLLEA RLNSYIPKAL
KTMRLVILLI VLAVIADAWG IFNLADWIAS DTGMYVLGTA ISVALILLGA LAIWLVFASW
IEHRLSPSTG EGEPGAREKT LLTLFRNAVA VVLAVMTTMI VLAEIGVNIG PLLAGAGVLG
LAVGFGAQKL VQDIITGVFI QLEKAINTGD VVTVAGLTGV VEKLTIRSMG LRDLSGTYHL
IPFSSVDAVS NYMREFAYHV GEYRVAYRED IDEVIVRLRE AFEELKEDPD QGPNILDEIE
VHGVTALADS SVNVRIRIKT LPGTQFGLGR AFNRLVKKHF DAAGIEIPFP HQTIYFGQEK
DGTAPPAHLR LTQETGEDTE DGRDYSKDRR ARPNPKHKGD YDEADD
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