| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0898 |
|---|
| Symbol | |
|---|
| ID | 8806653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 957564 |
|---|
| End bp | 958148 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003460149 |
|---|
| Protein GI | 289208083 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.866659 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACC GTTCCCGGCC TCTCGCCGGT TTGATTGCCG CCGCCGCGCT CGCGCTCGCC
AGCCCGCTGG TCATGGCCCA GGGCATGGGT CAGGAAGGCA TGGGCCAGCA GGGACAGCAG
CAAGGCGGTG CCGACCCGCA AATGGAAATG CAGCAACTGC AGCAGACCCT GGCCGAGACC
CAGCAGCAGG CGATCGAGAA CAACCCCGAT CTGGAACAAA AGGGCGAAGA GCTTGAAAAC
CTGGTGCTCA ACAAGATGGA AGAGGCCGGC TATCAGCCGC GCCAGGATCT CGAGACCCTG
GAAGGTGCCG AAGAACGCCT GCGCGACCCG GACCTGAGCG CCGAGGAACG CCAGCAGGTA
ATTCAGTCCG AAGACGTCCA GCAGGCGCAG ATGAACCTGC AGGAGGCCCA GCAGGCCGTG
GCGCAGGACG AGGAGATCAT CTCCGCTCAG GAATCGCTGC GTGAAGACCT GATGGCCGCG
ATGCGCGAAG AGAATCCGGA CATCGATGAT GTCATCGCGC GTCTGGAAAA CCTGCAGCAG
GAAATGCAGC AGGGCGGCAG CCCGGGCATG GCACCCCCGC AGTAA
|
|---|
| Protein sequence | MTNRSRPLAG LIAAAALALA SPLVMAQGMG QEGMGQQGQQ QGGADPQMEM QQLQQTLAET
QQQAIENNPD LEQKGEELEN LVLNKMEEAG YQPRQDLETL EGAEERLRDP DLSAEERQQV
IQSEDVQQAQ MNLQEAQQAV AQDEEIISAQ ESLREDLMAA MREENPDIDD VIARLENLQQ
EMQQGGSPGM APPQ
|
|---|
| |