Gene TK90_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0896 
Symbol 
ID8806651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp954389 
End bp955078 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content64% 
IMG OID 
Productprotein of unknown function UPF0005 
Protein accessionYP_003460147 
Protein GI289208081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.723604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCGAG ACCAGATCGT TCGCTCGAGT CGCAACCCGT CCAGTACCGG TTCCATCAGC 
GAGACCATCT CGACCAACAA GGTCATCCGA CAGACCTACA TGCTGCTGTC GGTCACCCTG
GCGTTCAGCG CGGTGATGGC CTTTGTGGCA ATGGCCGTGG GCGCCCCGGC GGTGCACTGG
CTGGTCCTGC TGGCCGTGCT GATTGGCGGT CCGTTTGCCA TCCATGCCGC GCGCAATTCC
GCGCTCGGGC TGGTGCTGAC CTTCGCCTTC ACCGGCGTGT TGGGCTTCTT CCTCGGCCCG
ATCCTGAGCA TGTACCTGGG CCTGCCCAAT GGCCCGCAGA TCGTCGGCAA TGCCTTTACC
GCCACGGCGG TCGCCTTTGT CGCGCTGTCC GGCTACGCCC TGGCCACCAA GAAGGACTTC
AGCTTCCTGG GTGGCTTCCT GGTGGTCGGC CTGATCGTCG CCCTGCTCGC GATCGTCGCC
AACCTCTTCC TGGCGATCCC GGCGCTGTCG CTGACCATCT CGGCGGCCGT GGTGCTGCTG
CTGTCGGCGG CGATCCTGTT CGACACCAGC CGCATGATCC ACGACCCGGA GGCCAACTAC
ATCATGATGA CGGTCTCGCT GTACGCGAAC CTCTACGTGA TGTTCCTCCA CCTGCTGAAC
CTGTTCCACG CCTTCATGGG CGACAACTAA
 
Protein sequence
MSRDQIVRSS RNPSSTGSIS ETISTNKVIR QTYMLLSVTL AFSAVMAFVA MAVGAPAVHW 
LVLLAVLIGG PFAIHAARNS ALGLVLTFAF TGVLGFFLGP ILSMYLGLPN GPQIVGNAFT
ATAVAFVALS GYALATKKDF SFLGGFLVVG LIVALLAIVA NLFLAIPALS LTISAAVVLL
LSAAILFDTS RMIHDPEANY IMMTVSLYAN LYVMFLHLLN LFHAFMGDN