Gene TK90_0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0849 
Symbol 
ID8806604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp905278 
End bp908223 
Gene Length2946 bp 
Protein Length981 aa 
Translation table11 
GC content67% 
IMG OID 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003460100 
Protein GI289208034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000864337 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTTA GCCTGGGCCT GATCTATGCA GTCGGCGTTG CCTACCTGGC CCTGCTTTTC 
GGGATCGCCT TCCTGGCCGA CCGGGTCCCG CGCATCGGGC GTATCGCAGC TAATAGCTGG
GTGTTCAGCC TGTCGCTCGG CGTCTATGCG ACATCCTGGA CCTTCTACGG CAACCTCGGC
TTTCTCGCGG ACCATGGCTA CCTGTACCTG ACGATCTACC TGGGTGTGAC GCTCGCCTTC
GCCGCCACCC CGTGGCTGCT GCGCCCGATC CTGCGCCTGA CCCGCGAGCA GCAACTCACC
TCGCTGGCGG ACCTGTTTGC GTTTCGCTAT CGCAGCCGCT GGACCGGGCC GATCGTCGCG
CTGTTCATGC TGTCCGGGGT ACTCCCGTAC ATTGCACTGC AGATCAAGGC GGTCGCCGAA
TCCGCGGGCG TGCTGACGGC CGAGACGCCG CCGCACCTGC TGGCCCTGAC CTTCAGCGCC
ACCATCGCGT TGTTCGCGAT CCTGTTCGGT GCCCGCCATA TCGCTCCGCG CGAGAAACAC
GCCGGACTGG TACTGGCCAT CGCGTTCGAG TCCATCGTGA AGCTGCTGGC GATCCTCGGC
ATCACTGCAG TCGCTCTTTA CGCAGTCTTC GGCGGGTTCT CCGGCCTGGA CACCTGGCTG
ACCGAGAACC CAGAGGCCGT GGATGCGCTG TATGCGCCGG TGCGCGAGGG CGGCTGGTTC
GCGATGATGA TCCTGGCGTT TGCCGCCGCC TTCCTGCTGC CGCGCCAGTT CCACATGCTC
TTTACCGAGA ACATCAACCC GGCGGCGCTC AACCGGGCCG CCTGGGCCTT TCCCGCCTTC
CTGCTCTTGC TGAACCTGCC GATGCCGGTG CTCTACTGGG CCGGCGAGGC GGCGGGCCTC
GGCATCGACA CCAACTACTA CGCGATCGGT ATCGCCGGTA TGCTCGACTC GCCGTCGCTG
GCCCTGCTGG TGTTCATTGG CGGGCTCTCC GCCGCCAGCG CGATGATGAT CGTGACCACG
CTGGCCCTGG CCCACATGGG GACCAACTAC CTCTCGCCAC TGACGCGCCT GCACGACGAG
GACAGCGCCG CCGCCAACCT CTATTCCCGG CTCCTGTGGG GGCGCCGCCT GTGGATCGTG
TTCATCATCG GTCTGGGTTA TGCGTTCTAC GGCTTGCTGC AGGTGGTCGA GGGCCTGGCC
CAGCTGGGCC TGATTTCGTT CGCGGCCGTG GCCCAGCTGC TGCCGGGGCT GATCGGGCTG
ATGCTGTGGA AACAGGCCAA CCGCGTCGGC TTCCTGCTGG GGCTGGGCGC GGGCATCACC
GGCTGGCTGT TGACGCTGGT GCTGCCGCTG ATGGCCAAGG CAGGGATCAT TGCTGGCTAC
CCGGACCCAC AGGCAATGCT TCGGGCCGAG GCCCTGGACC CATGGACCTT TGCCCTGATG
TGCAGCCTTG GCATCAATGC CGTGCTGTTT GTGCTCGGAT CACTGCTGAC CCGCCCCAAC
CGCGAGGAGA CCGAGGCCGG GCGCGCCTGC TGCCCCAACG AATCGGCCGG GACCGGCGGC
GGCCTGCCGC TGGCCGGCGA TGTCACCGAG ATGGAGACCG CACTGGCCGC CACGCTCGGT
GCCAGCGCCG CCCGTCACGA GGTCCAGCGT GCACTAGACG ACCTCGGCCT GCCGCGCCAC
ACCCGCTCGC GCGGCGACCT GCGCACACTG CGCGAGCGCA TCGAGCGCAA CCTGTCAGGC
CTGCTGGGCC CGGTGCTCGC CCGCATGATT GTGGACCAGC ACCTGCGTCT CGACGCCGCC
GGGCGCCACA CCCTGAGCGA AAGCCTGCGC CGGGTGGAGG AGCAGCTCGA GACCCGAGCC
CTGCCCCTGT CGGGTCTGGC GGCCGAGCTG GACGCCCTGC GCCGCTTCCA CCGGCAAATC
CTGCACGAAC TGCCGCTGGG GGTCGCAAGC CTTGGCACCA CCGGCGAGAT CACCGGCTGG
AACCAGGCCC TGGCCAAACT CACCGCGATC AGCACCGAAC AGGCCGTCGG ATGCAATCTG
CAGCAGCTCG AAAGCCCCTG GGCGGGGCTG CTGACCGCCT TTATCGAAAG CCCGGATCGC
CAGTGGTACA AACTCAATGT CGACCTGCCC GATGGCAACC GTCGGCTGAA TCTCCACAAA
TCCGCACTCC AGGACGAACA TGGCCGGCTG GAGGGCCGCA TCGTCCTGAT CGAGGACATC
ACCGAACGCG CCCAGCTGGA ATCCGAGATC GCCCACGGCG ACCGCCTCGC CTCGATCGGA
CGCTTCGCGG CCGGGGTCGC ACACGAGATC GGCAACCCCC TGACCGGCAT CGCCTCGCTG
GCGCAAAACC TCCCACTGGA GCAAGACCCC GAGGAGGTGA GGGGCACCGC CGAGGACATC
CTCGCGCAGA CACGCCGGAT CAACGCCATC GTGCAGTCAC TGGTCACCTT CGCCCATGCC
GACGAGGGTC CCTCCGCCGG GCATTTCGAG ACCATCGCGC TGGATGCCAT CGTCCAAGAG
GCGATCCGCC TCACCCGCCT GGCCGGACGC AAGGACCTGC GCTTTGATCT GGACGGCCTC
GAAGGCCACT ACCTGCGCGG CTCGCACGCG ACCCTGCTGC AGGTATTCAT CAACCTGCTG
ACCAACGCCG AACAGGCCTC GCCCGAGAAT GCGACGGTAT CGATCAGCGC GAGCGCTCGC
GGTCGCAATA TCCACCTGAT CATCGACGAC CGCGGGCCAG GGATCGAGGA ATCCAGCCTG
GAGCGGCTGT TCGAGCCGTT CTTTACCACC AAGCCCGCGG GCCACGGCAC CGGACTCGGT
CTGCCAGTGG CCTACAGCAT TGTGCGCGAC CACGGTGGTA CCCTGATGGC CGCGAACCGC
CCGGAGGGCG GGGCGCGCTT TATCCTGATC CTGCCGCGAC ACAAACCCGA TGGCGACCAC
GCATGA
 
Protein sequence
MTLSLGLIYA VGVAYLALLF GIAFLADRVP RIGRIAANSW VFSLSLGVYA TSWTFYGNLG 
FLADHGYLYL TIYLGVTLAF AATPWLLRPI LRLTREQQLT SLADLFAFRY RSRWTGPIVA
LFMLSGVLPY IALQIKAVAE SAGVLTAETP PHLLALTFSA TIALFAILFG ARHIAPREKH
AGLVLAIAFE SIVKLLAILG ITAVALYAVF GGFSGLDTWL TENPEAVDAL YAPVREGGWF
AMMILAFAAA FLLPRQFHML FTENINPAAL NRAAWAFPAF LLLLNLPMPV LYWAGEAAGL
GIDTNYYAIG IAGMLDSPSL ALLVFIGGLS AASAMMIVTT LALAHMGTNY LSPLTRLHDE
DSAAANLYSR LLWGRRLWIV FIIGLGYAFY GLLQVVEGLA QLGLISFAAV AQLLPGLIGL
MLWKQANRVG FLLGLGAGIT GWLLTLVLPL MAKAGIIAGY PDPQAMLRAE ALDPWTFALM
CSLGINAVLF VLGSLLTRPN REETEAGRAC CPNESAGTGG GLPLAGDVTE METALAATLG
ASAARHEVQR ALDDLGLPRH TRSRGDLRTL RERIERNLSG LLGPVLARMI VDQHLRLDAA
GRHTLSESLR RVEEQLETRA LPLSGLAAEL DALRRFHRQI LHELPLGVAS LGTTGEITGW
NQALAKLTAI STEQAVGCNL QQLESPWAGL LTAFIESPDR QWYKLNVDLP DGNRRLNLHK
SALQDEHGRL EGRIVLIEDI TERAQLESEI AHGDRLASIG RFAAGVAHEI GNPLTGIASL
AQNLPLEQDP EEVRGTAEDI LAQTRRINAI VQSLVTFAHA DEGPSAGHFE TIALDAIVQE
AIRLTRLAGR KDLRFDLDGL EGHYLRGSHA TLLQVFINLL TNAEQASPEN ATVSISASAR
GRNIHLIIDD RGPGIEESSL ERLFEPFFTT KPAGHGTGLG LPVAYSIVRD HGGTLMAANR
PEGGARFILI LPRHKPDGDH A