Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0849 |
Symbol | |
ID | 8806604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 905278 |
End bp | 908223 |
Gene Length | 2946 bp |
Protein Length | 981 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_003460100 |
Protein GI | 289208034 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000864337 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCTTA GCCTGGGCCT GATCTATGCA GTCGGCGTTG CCTACCTGGC CCTGCTTTTC GGGATCGCCT TCCTGGCCGA CCGGGTCCCG CGCATCGGGC GTATCGCAGC TAATAGCTGG GTGTTCAGCC TGTCGCTCGG CGTCTATGCG ACATCCTGGA CCTTCTACGG CAACCTCGGC TTTCTCGCGG ACCATGGCTA CCTGTACCTG ACGATCTACC TGGGTGTGAC GCTCGCCTTC GCCGCCACCC CGTGGCTGCT GCGCCCGATC CTGCGCCTGA CCCGCGAGCA GCAACTCACC TCGCTGGCGG ACCTGTTTGC GTTTCGCTAT CGCAGCCGCT GGACCGGGCC GATCGTCGCG CTGTTCATGC TGTCCGGGGT ACTCCCGTAC ATTGCACTGC AGATCAAGGC GGTCGCCGAA TCCGCGGGCG TGCTGACGGC CGAGACGCCG CCGCACCTGC TGGCCCTGAC CTTCAGCGCC ACCATCGCGT TGTTCGCGAT CCTGTTCGGT GCCCGCCATA TCGCTCCGCG CGAGAAACAC GCCGGACTGG TACTGGCCAT CGCGTTCGAG TCCATCGTGA AGCTGCTGGC GATCCTCGGC ATCACTGCAG TCGCTCTTTA CGCAGTCTTC GGCGGGTTCT CCGGCCTGGA CACCTGGCTG ACCGAGAACC CAGAGGCCGT GGATGCGCTG TATGCGCCGG TGCGCGAGGG CGGCTGGTTC GCGATGATGA TCCTGGCGTT TGCCGCCGCC TTCCTGCTGC CGCGCCAGTT CCACATGCTC TTTACCGAGA ACATCAACCC GGCGGCGCTC AACCGGGCCG CCTGGGCCTT TCCCGCCTTC CTGCTCTTGC TGAACCTGCC GATGCCGGTG CTCTACTGGG CCGGCGAGGC GGCGGGCCTC GGCATCGACA CCAACTACTA CGCGATCGGT ATCGCCGGTA TGCTCGACTC GCCGTCGCTG GCCCTGCTGG TGTTCATTGG CGGGCTCTCC GCCGCCAGCG CGATGATGAT CGTGACCACG CTGGCCCTGG CCCACATGGG GACCAACTAC CTCTCGCCAC TGACGCGCCT GCACGACGAG GACAGCGCCG CCGCCAACCT CTATTCCCGG CTCCTGTGGG GGCGCCGCCT GTGGATCGTG TTCATCATCG GTCTGGGTTA TGCGTTCTAC GGCTTGCTGC AGGTGGTCGA GGGCCTGGCC CAGCTGGGCC TGATTTCGTT CGCGGCCGTG GCCCAGCTGC TGCCGGGGCT GATCGGGCTG ATGCTGTGGA AACAGGCCAA CCGCGTCGGC TTCCTGCTGG GGCTGGGCGC GGGCATCACC GGCTGGCTGT TGACGCTGGT GCTGCCGCTG ATGGCCAAGG CAGGGATCAT TGCTGGCTAC CCGGACCCAC AGGCAATGCT TCGGGCCGAG GCCCTGGACC CATGGACCTT TGCCCTGATG TGCAGCCTTG GCATCAATGC CGTGCTGTTT GTGCTCGGAT CACTGCTGAC CCGCCCCAAC CGCGAGGAGA CCGAGGCCGG GCGCGCCTGC TGCCCCAACG AATCGGCCGG GACCGGCGGC GGCCTGCCGC TGGCCGGCGA TGTCACCGAG ATGGAGACCG CACTGGCCGC CACGCTCGGT GCCAGCGCCG CCCGTCACGA GGTCCAGCGT GCACTAGACG ACCTCGGCCT GCCGCGCCAC ACCCGCTCGC GCGGCGACCT GCGCACACTG CGCGAGCGCA TCGAGCGCAA CCTGTCAGGC CTGCTGGGCC CGGTGCTCGC CCGCATGATT GTGGACCAGC ACCTGCGTCT CGACGCCGCC GGGCGCCACA CCCTGAGCGA AAGCCTGCGC CGGGTGGAGG AGCAGCTCGA GACCCGAGCC CTGCCCCTGT CGGGTCTGGC GGCCGAGCTG GACGCCCTGC GCCGCTTCCA CCGGCAAATC CTGCACGAAC TGCCGCTGGG GGTCGCAAGC CTTGGCACCA CCGGCGAGAT CACCGGCTGG AACCAGGCCC TGGCCAAACT CACCGCGATC AGCACCGAAC AGGCCGTCGG ATGCAATCTG CAGCAGCTCG AAAGCCCCTG GGCGGGGCTG CTGACCGCCT TTATCGAAAG CCCGGATCGC CAGTGGTACA AACTCAATGT CGACCTGCCC GATGGCAACC GTCGGCTGAA TCTCCACAAA TCCGCACTCC AGGACGAACA TGGCCGGCTG GAGGGCCGCA TCGTCCTGAT CGAGGACATC ACCGAACGCG CCCAGCTGGA ATCCGAGATC GCCCACGGCG ACCGCCTCGC CTCGATCGGA CGCTTCGCGG CCGGGGTCGC ACACGAGATC GGCAACCCCC TGACCGGCAT CGCCTCGCTG GCGCAAAACC TCCCACTGGA GCAAGACCCC GAGGAGGTGA GGGGCACCGC CGAGGACATC CTCGCGCAGA CACGCCGGAT CAACGCCATC GTGCAGTCAC TGGTCACCTT CGCCCATGCC GACGAGGGTC CCTCCGCCGG GCATTTCGAG ACCATCGCGC TGGATGCCAT CGTCCAAGAG GCGATCCGCC TCACCCGCCT GGCCGGACGC AAGGACCTGC GCTTTGATCT GGACGGCCTC GAAGGCCACT ACCTGCGCGG CTCGCACGCG ACCCTGCTGC AGGTATTCAT CAACCTGCTG ACCAACGCCG AACAGGCCTC GCCCGAGAAT GCGACGGTAT CGATCAGCGC GAGCGCTCGC GGTCGCAATA TCCACCTGAT CATCGACGAC CGCGGGCCAG GGATCGAGGA ATCCAGCCTG GAGCGGCTGT TCGAGCCGTT CTTTACCACC AAGCCCGCGG GCCACGGCAC CGGACTCGGT CTGCCAGTGG CCTACAGCAT TGTGCGCGAC CACGGTGGTA CCCTGATGGC CGCGAACCGC CCGGAGGGCG GGGCGCGCTT TATCCTGATC CTGCCGCGAC ACAAACCCGA TGGCGACCAC GCATGA
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Protein sequence | MTLSLGLIYA VGVAYLALLF GIAFLADRVP RIGRIAANSW VFSLSLGVYA TSWTFYGNLG FLADHGYLYL TIYLGVTLAF AATPWLLRPI LRLTREQQLT SLADLFAFRY RSRWTGPIVA LFMLSGVLPY IALQIKAVAE SAGVLTAETP PHLLALTFSA TIALFAILFG ARHIAPREKH AGLVLAIAFE SIVKLLAILG ITAVALYAVF GGFSGLDTWL TENPEAVDAL YAPVREGGWF AMMILAFAAA FLLPRQFHML FTENINPAAL NRAAWAFPAF LLLLNLPMPV LYWAGEAAGL GIDTNYYAIG IAGMLDSPSL ALLVFIGGLS AASAMMIVTT LALAHMGTNY LSPLTRLHDE DSAAANLYSR LLWGRRLWIV FIIGLGYAFY GLLQVVEGLA QLGLISFAAV AQLLPGLIGL MLWKQANRVG FLLGLGAGIT GWLLTLVLPL MAKAGIIAGY PDPQAMLRAE ALDPWTFALM CSLGINAVLF VLGSLLTRPN REETEAGRAC CPNESAGTGG GLPLAGDVTE METALAATLG ASAARHEVQR ALDDLGLPRH TRSRGDLRTL RERIERNLSG LLGPVLARMI VDQHLRLDAA GRHTLSESLR RVEEQLETRA LPLSGLAAEL DALRRFHRQI LHELPLGVAS LGTTGEITGW NQALAKLTAI STEQAVGCNL QQLESPWAGL LTAFIESPDR QWYKLNVDLP DGNRRLNLHK SALQDEHGRL EGRIVLIEDI TERAQLESEI AHGDRLASIG RFAAGVAHEI GNPLTGIASL AQNLPLEQDP EEVRGTAEDI LAQTRRINAI VQSLVTFAHA DEGPSAGHFE TIALDAIVQE AIRLTRLAGR KDLRFDLDGL EGHYLRGSHA TLLQVFINLL TNAEQASPEN ATVSISASAR GRNIHLIIDD RGPGIEESSL ERLFEPFFTT KPAGHGTGLG LPVAYSIVRD HGGTLMAANR PEGGARFILI LPRHKPDGDH A
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