| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0840 |
|---|
| Symbol | |
|---|
| ID | 8806595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 898430 |
|---|
| End bp | 899185 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003460091 |
|---|
| Protein GI | 289208025 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.220158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCATA CCCCTTTTCT GAAGGATTTC TACGAACTCC GGGATGGCCA GTTGGTGGTT
ACTCCCGAAC AGGGCAGCGA CTTCGCCAAG ACGCTGGCGG GCGATTTCAA CCCGATCCAT
GACGCCGACA ATCGGCGCTT CTGTGTGCCG GGTGATCTGC TGTTTGCCCT GGTGCTGGAT
ACGTTCGGCG CGAGCGCGAA CATGCATTTC CGTTTCACCA GCATGGTGGG CGGGCATGTG
CCGTTGATCT TCCCGGACAA CCCGGGTGAT GCCTTTGCCA TTACGGCGGA CGGCGGCAAG
AGCGTGATCG AGGTCGAGCG TTCCGGCCGT GTGATCAATG ATCCGGATGT GATCGAGTCG
CTGATCCGCA GCTACGTCAG TTTCTCCGGG CAGAACTTCC CGCATGTGCT CGTGCCGCTG
ATGGAGGAGC ACGGGGTGAT GGTGAACCCC AAACGCCCGC TGGTGATGTA CGAGCGCATG
GGGTTCCGCT TGCCGGAGCC ACTGGCCGCG ACGGCGGGTG TTCCCGAGCC GCGGCTCAAG
GATGCGGTGA TGACCGTCCA TGGCAAGCGC GGGGAAATCC GCCTCGACTA CGAGCTGGTG
ATCGACCAGG CCGTGGTGGC CGAAGGCAGC AAGCATCTGG TGCTGAGCGG GCTGCGGCCG
TTTGATGCGG CGGACGTCGA ACAACTGGTG GCCGACTACG AGGGCTGGAA GGCCGCCTAC
ATCGGCGAGG TCCGCGCACG GCGGGTGGTC GGATAA
|
|---|
| Protein sequence | MSHTPFLKDF YELRDGQLVV TPEQGSDFAK TLAGDFNPIH DADNRRFCVP GDLLFALVLD
TFGASANMHF RFTSMVGGHV PLIFPDNPGD AFAITADGGK SVIEVERSGR VINDPDVIES
LIRSYVSFSG QNFPHVLVPL MEEHGVMVNP KRPLVMYERM GFRLPEPLAA TAGVPEPRLK
DAVMTVHGKR GEIRLDYELV IDQAVVAEGS KHLVLSGLRP FDAADVEQLV ADYEGWKAAY
IGEVRARRVV G
|
|---|
| |