| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0837 |
|---|
| Symbol | |
|---|
| ID | 8806592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 893452 |
|---|
| End bp | 895263 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003460088 |
|---|
| Protein GI | 289208022 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.568302 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGCC ACGCGAGCCA TCCGGACGCC CCAACCCCCG GGGCGGTGAA CTGGCGCATC
CTCAAGAGCC TGCTCCCCTA TCTGGCGGAG TTTCGCGGGC GGCTGATCCT GGCGCTCGTG
CTGATGGGGC TGGCCAAGCT GGCCACGGTC GCGATCCCGC TGGCGCTGAA ATACATCGTC
GAGCACTTCG AGGACGCCGG TACCGAGGCA CTGGTCGCCG TACCGGTGGC CCTGGTGATC
GGCTACGGGC TATTGCGCTT TGGCAGCACG CTGTTCGGCG AGCTGCGCGA CGCAGTCTTC
GTGCGCGTGG CGGAACGCGC GATGCGCCGC GCCTCGCTGC GCGTCTTCCA GCACCTGCAC
CGGCTGGAAC TGGGTTTTCA TCTGGCTCGC GAGACCGGCG GCCTGGCGCG CGACATCGAG
CGCGGCACCA GCGGCATGAG CTTCCTGCTG CGCTTTACCG TATTCAACAT CCTGCCGACC
CTGATCGAGA TCGCGCTGGT CGCGGTGATC CTGCTGATCG CCGTGGGGCC GGTGTTCATG
GTCACGGTGC TGGTGGCCGT CGCGGTCTAC ATCGCCTTCT CGATCTGGAT CACCGAATGG
CGCACGCGCT TCGTGCGCGA GGCCAACCTG CGCGACAACG AGTCCAACAC CCGCGCGATC
GACAGCCTGC TGAACTACGA AACCGTCAAG TACTTCGGCA ACGAGTCCTT CGAGGCCGAA
CGCTACGACC GCGGGCTCGC GGCCTGGGAA CAGGCACGCA CCAAGAACGT CCTCACGCTC
GTGCTGCTGA ACTCCGGACA GGCGCTGATC ATCGCCGCCG CGATCACCGT GATCATGCTG
CTGGCCACGC GTCAGGTGGC TGCCGGCGAG ATGTCACTGG GGGATCTGGT GATGGTCAAT
GCCTACATGA TTCAGCTGTT CATGCCGCTG AACTTCCTCG GCTTCGTCTA TCGCGAGATC
CGCCAGTCGC TGGCCAACAT CGAGCGTTTG TTCGGCCTGC TGGAAAAGCC CGTGCAGGTG
GAGGACCGCC CGGATGCCCC CGATCTCGAA GTCCGGGCGG GCACGGTGCG CTTCGAACAT
GTGGATTTCG GCTACCACGG CAACCGGCGC ATCCTCGACG ACGTCTCGCT GGAGATCCCG
GCCGGGCACA AGCTGGCCGT GGTCGGCCCC AGCGGGGCCG GCAAATCCAC TCTGGCGCGG
TTGCTGTTTC GGTTCTACGA CGTGGACGGC GGGCGCATCA CCATTGACGG TCAGGATATA
CGCGAGGTCA CGCAGGCCAG CCTGCGCCGC GCCATCGGCG TGGTGCCGCA GGATACCGTG
CTGTTCAACG ACAGCATCCG CTACAACGTC GCCTACGGCC AGCCAGGCGC GGACGAGCAA
GCCATTCGCC GCGCGGTGCG CCTCGCCCAC CTCGACGACT TCATCGCGCA GCTGCCGGAC
GGGCTGGATA CGATTGTGGG GGAACGGGGG CTGAAGGTCT CCGGCGGGGA AAAACAGCGG
ATCGCGATCG CCCGCATGCT GCTGAAGGAT CCACCGATCC TGGTCTTCGA CGAGGCGACT
TCGTCGCTGG ATTCAGGATC GGAGAAGGCG ATCCTGCGGG CGCTGAACGA GATCTCGGTG
CGCCGGACCA CGCTGGTCAT TGCCCATCGG CTGTCCACTG TGATGGACGC CGAACAGATC
GTGGTGATGG AGCACGGCCG GGTGGTCGAG CGCGGCACGC ATCGCGAGCT GCTGGCAAAG
GGTGGCGCCT ATGCGCGCCT ATGGCACCAT CAGCAGGAAG AGGCCGAGCA CACCCTCGAA
GGCGACGGGT AA
|
|---|
| Protein sequence | MRGHASHPDA PTPGAVNWRI LKSLLPYLAE FRGRLILALV LMGLAKLATV AIPLALKYIV
EHFEDAGTEA LVAVPVALVI GYGLLRFGST LFGELRDAVF VRVAERAMRR ASLRVFQHLH
RLELGFHLAR ETGGLARDIE RGTSGMSFLL RFTVFNILPT LIEIALVAVI LLIAVGPVFM
VTVLVAVAVY IAFSIWITEW RTRFVREANL RDNESNTRAI DSLLNYETVK YFGNESFEAE
RYDRGLAAWE QARTKNVLTL VLLNSGQALI IAAAITVIML LATRQVAAGE MSLGDLVMVN
AYMIQLFMPL NFLGFVYREI RQSLANIERL FGLLEKPVQV EDRPDAPDLE VRAGTVRFEH
VDFGYHGNRR ILDDVSLEIP AGHKLAVVGP SGAGKSTLAR LLFRFYDVDG GRITIDGQDI
REVTQASLRR AIGVVPQDTV LFNDSIRYNV AYGQPGADEQ AIRRAVRLAH LDDFIAQLPD
GLDTIVGERG LKVSGGEKQR IAIARMLLKD PPILVFDEAT SSLDSGSEKA ILRALNEISV
RRTTLVIAHR LSTVMDAEQI VVMEHGRVVE RGTHRELLAK GGAYARLWHH QQEEAEHTLE
GDG
|
|---|
| |