| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0822 |
|---|
| Symbol | |
|---|
| ID | 8806577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 879961 |
|---|
| End bp | 880944 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, MerR family |
|---|
| Protein accession | YP_003460073 |
|---|
| Protein GI | 289208007 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.528612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.372171 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCG CGACACAATT GGGCACATCC GAACAGGAAG GTCTTTATCC CATCCGCCAC
GTGTGCGCGG AGACCGGGAT CAATGACGTC ACTCTGCGCG CCTGGGAGCG CCGCTACGGG
CTGATTCGCC CGATGCGCAC GCCCAAGGGT CATCGGCTGT ACAGCGCAGA CGACATTGCC
CGCATCAAGC GCATACTGGA GCTGCTCGAC CAAGGGATTC CGGTCTCCCA GGTCCATCGG
GTCCTGGCCA GCGAAAACGC AACGGTGGAA CTGCCCTCCT CGCCGCACAC CGAATCCGAA
GCGCCCGCCA ACCACAATCG CACGGGCAGC AGCAAACCCG GTATTGCCCC TCACACGCTC
GACCCACTGG CCGAGGCGCT CTATGCCTCT GCCGCGGAAC TGGACGTTAG TCAGCTGGAA
AGGACCTACG CCCGCCTGGT CATGCGCCAC GGCTGGAACG GCGTGCACGA AAGCGCCTTT
CTCGACGTCT ATCGGCGTCT GCGCGAGGAA TCGCGGCACT CGCCCGAAGG CGAGGTTCGC
CTGGCGGTTT TCGCGGCCTG GGCGACCGCG GCCTTTTCCG ACCAGCTGCG CGCCGCGATC
CGGGCCTGCG AGGGCCCCTC GATCCCGTGC CTGGTACTGG GGGGCGGGCA CCAGCAAGTG
GGCGGGATGT TACTGCAGCT GGCCTGCGCC CGACGGGGCC TGAAGACCCT TCCGCTGTTC
GACGCCACCA GCCCCCAGGC CCTAGAGGCA CTGGTGCAGC GTCTGTCGGC CCCTGCGGTG
ATCATCCATG GATCCTCGCA GCTGATGCGT TCGCCCGAAC TGCCGCGCGT CGAGGCCATC
CTGAGTCGTC CCGGTCCGCG CTGCTATCTG GCGGGTTCCG CCGCGCTGGA ACTCGCCCAG
ATGGATCATC AGCGCGAGAT CGAAGTGCTG CCCGGCGCGC CGCTCGAAGC GGCCGAACTC
CTCAGCCGGC AGCTGCCTCA CTGA
|
|---|
| Protein sequence | MASATQLGTS EQEGLYPIRH VCAETGINDV TLRAWERRYG LIRPMRTPKG HRLYSADDIA
RIKRILELLD QGIPVSQVHR VLASENATVE LPSSPHTESE APANHNRTGS SKPGIAPHTL
DPLAEALYAS AAELDVSQLE RTYARLVMRH GWNGVHESAF LDVYRRLREE SRHSPEGEVR
LAVFAAWATA AFSDQLRAAI RACEGPSIPC LVLGGGHQQV GGMLLQLACA RRGLKTLPLF
DATSPQALEA LVQRLSAPAV IIHGSSQLMR SPELPRVEAI LSRPGPRCYL AGSAALELAQ
MDHQREIEVL PGAPLEAAEL LSRQLPH
|
|---|
| |