Gene TK90_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0817 
Symbol 
ID8806572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp875525 
End bp875878 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, SARP family 
Protein accessionYP_003460068 
Protein GI289208002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.686182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTCATC TGGAGATCAC GACCTTCGGC ACAGTCGGCG TGCGGGTCGA GGGACGAGAT 
GTGCCCGCCC TGTCCGGCAC CAAGTTGGGG CTGCTGCTGA CCTACCTGGC GGCCGAATGT
CCACGGCGCG TTCCACGCCA GGAGCTGGCG CACCTGTTCT GGCCCGAGCT GGACAGCGAC
AGCGCACGTG TCAACCTGCG CCAGGGCCTC TTTCAGCTGC GGCGCCAACT CCCGGACCTG
CCCACCGCCC TGCTTGAAGC CACACCGCGC TACGTCCACT TTCAGCTTCA GCCCGGCACA
CCGAGATCGA TTTCCTCGCC CTGCACCGCC TGCGGGCCGA CCGCAGCCAC CTGA
 
Protein sequence
MAHLEITTFG TVGVRVEGRD VPALSGTKLG LLLTYLAAEC PRRVPRQELA HLFWPELDSD 
SARVNLRQGL FQLRRQLPDL PTALLEATPR YVHFQLQPGT PRSISSPCTA CGPTAAT