| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0778 |
|---|
| Symbol | |
|---|
| ID | 8806530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 832367 |
|---|
| End bp | 833035 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003460029 |
|---|
| Protein GI | 289207963 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00706916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCAT TCGCCGCTGA AACCCTGCTG TCGATCTTCG GGCAATACAA TCGCGCCATC
TGGCCGTTGC ACGCGGTCGC GGTGCTAATG GTGCTCGTTA CACTGGCACT GGCCCTGATG
GGCGGCCGGG GGGGCGGGCG TGTTGTGGGC CTTTTGCTCG GCGTGCTGTG GATCTGGATC
GGGGTCGTGT TCATCGGGGG CGCGCTGGCC GAATTCCACT TCTGGGCGAG TCGTCTGGCA
GGCGTGTTCG TCGCACAGGG CCTGATGCTC CTGTTCGCCC TCACGCTGCT GGGACGTCAT
GGCTTTGGCT GGCCGGGCGG TGTGGCCGGC CTTGTCGCGA TCGTGGTGAT AGCCTATGCC
ATGGTCGGTC ATGCCCTGCT GGAGGTCCTG CTCCTGGGGG TGTCCTGGAC CCAAGCGCAG
TACGTGGGCG TGACGCCGGG ACCCACCATG CTGTTCACCC TCGGCATCCT GCTGCTGGCG
CAGCCGCGCC CGTCACTGAT CTTGACGATC ATTCCCTTCC TCTGGGCTCT GGTGACCGCC
TACATCGCCT GGGAACTGGG CGTCTGGCTG GAATATTTAC CGGCCGCGCT GGGCGTGATC
GCTTTCGTAC TGCTGCTGGT TCGGCGGTTT CACTCGAGCG AGAGACAGTT GTTCCGCTTC
GACGGATAG
|
|---|
| Protein sequence | MLPFAAETLL SIFGQYNRAI WPLHAVAVLM VLVTLALALM GGRGGGRVVG LLLGVLWIWI
GVVFIGGALA EFHFWASRLA GVFVAQGLML LFALTLLGRH GFGWPGGVAG LVAIVVIAYA
MVGHALLEVL LLGVSWTQAQ YVGVTPGPTM LFTLGILLLA QPRPSLILTI IPFLWALVTA
YIAWELGVWL EYLPAALGVI AFVLLLVRRF HSSERQLFRF DG
|
|---|
| |