Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0747 |
Symbol | |
ID | 8806499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 804649 |
End bp | 805320 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | SH3 type 3 domain protein |
Protein accession | YP_003459998 |
Protein GI | 289207932 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.737652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGAC TTACGGTATC CGGGATTCTG ATCCTGGGCG GCTTGACCGC GACGGCGGTG ATGGCCGAGA CCACGCGTTT CGTCAGCGAC GAGCTGGAGG TCGGGGTGCG GAATGGCACC GGGCCGAACA GCCGCATTAT CAGTTCAGTG CGCTCGGGTC AGGAGGTCAC GGTGCTCGAG GAGAGCGGCG ATGGCCATAC CCGTATTCGC CTGCCCAGCG GCACCGAGGC CTGGATCCTG ACCCGTTACC TGCAGGACGA GCCGCATTCC CGTGAACGCC TGGAAGAGGT CGAGGCCGAG CTGGCCGAGA TTCGCTCGGG TGCGGACGAC CAGGAAGGCC GGATTGCCGA ACTGCTGGAT ACCCGCCGCG AACTCGAAGC CGAGCGCGAT GGCCTGGAGA CGCAGGTGGC GGACATGGAG TCCGAGCTCG AGGAGCTGCG CGACGTCGCG GAACGGCCGC AGGAGATCCA GCGCGAAAAC CGGCGCCTGG AAAGCGAGCT GGTAGAGGCC CGTGATTCCG CGGACGAGTA TCGCCGCCAG GTGGAGGTGA TGCAGGCCGA CAGCCAGCGG CGGTGGTTCA TGACGGGTGC GGCGGTGACG GTTGGCAGCC TGATTCTTGG CATTATCCTG ACGCGCATCC CATTGCGCCG CCGCCGCAGC GACTGGTACT GA
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Protein sequence | MRGLTVSGIL ILGGLTATAV MAETTRFVSD ELEVGVRNGT GPNSRIISSV RSGQEVTVLE ESGDGHTRIR LPSGTEAWIL TRYLQDEPHS RERLEEVEAE LAEIRSGADD QEGRIAELLD TRRELEAERD GLETQVADME SELEELRDVA ERPQEIQREN RRLESELVEA RDSADEYRRQ VEVMQADSQR RWFMTGAAVT VGSLILGIIL TRIPLRRRRS DWY
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