Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0733 |
Symbol | |
ID | 8806485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 787575 |
End bp | 788345 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | type IV pilus biogenesis/stability protein PilW |
Protein accession | YP_003459984 |
Protein GI | 289207918 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACTGC GCTGGGGGCG CCCGGCCGTC GTGATACTGC TGGGGCTGGC CCTCGGAGGA TGCGCGGCGA TGGCCGAACG CGAGGTCACC GGCGAGCGCG CAGAGGCCGC GGAGGTCAAT GCCGAGCTGG GCATCGGGTA TTTGCGCGAG GGAGAGGTTG ACCAGGCCGA ACGCAATCTT AAGCGGGCGC TGGAATTCGA TCCTGGCCAT CCGCTCGCCA ATCTGGGCAT GGCCAATGTC TACGAGCGCC GGGGTGCGCT TGACCGAGCG GAAGAGCACT ACCGCCGGGC ACTGCGTCGG GACGATGGCA ACCCCTATGT GCAGACCAGC CTCGGGGCCC TGCTGTGCCG GCGCGAGGCC TTCGACGAGG CGCAGGAGCT GTTTGCCAGG GCGATCGACA ATCCCGATTA CGACCAGCGC GAGATTGCGT TGATGAACTC CGGTGTCTGC TTTGCCGATG CCGGACAGAC GGAACGCGCC GAGGAGAAGC TGCGCGAGGC GCTGCGGATC AACCCGCAGT ACCCGCGTGC CCTCCTGGAA ATGGCAAGTC TGACCTACGA AGACGACCGC CCGATGCAGA CAAGGGCGTT CCTGCAACGC CTGGAAGGAC TGGGTGTGGA AAGTTCCGAG ACGCTGTTCC TCTGCTATCG GGCGGAATTG GCGCTCGGGA ACCGGCGTGC GGCGAACGAC TGCGCGGAAC GCCTGCGGCG TCAGTACCCG GACAGCATGG AGCTGGTCCG CCTGGAAGAC ATGGAGCGCA ATGGTGGCTG A
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Protein sequence | MGLRWGRPAV VILLGLALGG CAAMAEREVT GERAEAAEVN AELGIGYLRE GEVDQAERNL KRALEFDPGH PLANLGMANV YERRGALDRA EEHYRRALRR DDGNPYVQTS LGALLCRREA FDEAQELFAR AIDNPDYDQR EIALMNSGVC FADAGQTERA EEKLREALRI NPQYPRALLE MASLTYEDDR PMQTRAFLQR LEGLGVESSE TLFLCYRAEL ALGNRRAAND CAERLRRQYP DSMELVRLED MERNGG
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