| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0727 |
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| Symbol | |
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| ID | 8806479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 781472 |
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| End bp | 782431 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003459978 |
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| Protein GI | 289207912 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.414989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCG CACGTCGCGA GGTCGACGGT ATTCTGCTGC TGGATAAGCC CCGCGGGCCG
AGTTCTACCC AGGTCCTGGG GCGCGTGAAG TATCTGTTGC AGGCCAGGAA GGCCGGCCAC
ACCGGGGCGC TGGACCCACG GGCGACCGGC CTTTTGCCAC TGTGCTTCGG GCAGGCGACC
AAGGTCTCGG GCTGGCTGTT GGACGCTGAC AAGCACTATG TCGCCGAGGC GCAGCTGGGG
GTCGAGACCG ACAGCGCCGA TCTCGATGGC GCGATCATCC GCGAGGCGCC GGTGCCGGCC
ATCGAGCCGG AGCGGCTGCG GGCGCTGGAA CAGCAGTTCA GCGGGGCGCA GGAGCAGGTG
CCGCCGATGG TCTCGGCCCT TAAGCACGAT GGCCAGCGGC TCTATGAGTT GGCGCGCCGG
GGCGTGGAGG TCGAGCGCCC CCCGCGGCCC GTGCAGATCC ATGCCCTGTC CATCGAAGCC
ATCGCGCCCG AGCGGCTGCG TATCGACGTG CGCTGCAGCA AGGGCACCTA TGTGCGTTCC
CTGGTGGTCG ACATCGGGCA TGCACTGGGT TGCGGGGCGG CGGTCGACAG CCTGCGGCGC
ATCGGCCACG GCCCGTTCGA GGCCGCCGCG ATGGTGACGA TGGAGCAGGT GGAAGCCGCA
TTCGAGGCGG GGGGTGCGGC CGCGATCGAG GCCATGCTGC AGGCCCCGGA AACGGCACTG
GGACACTGGC CTTCGGTGTC CCTCAATGCC CAGGCCAGCG CGGCCATGCG CCATGGTCAC
CCAGCGGATC CCGAGGCGAT CGAATCCCGG ACCCCGGGTA CGGAAGGCGC GCCGGTCGAG
GCCGAAAGCG GCTGGCCGCT GGTCCGGGTG TATGACGCCG AGGGTGGTTT TCTGGCGGTC
GGTGCGCGCG AACCGGACGG CCGGGTGCGG CCACGCCGGC TGTTTGTCCC GGCCCCCTGA
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| Protein sequence | MARARREVDG ILLLDKPRGP SSTQVLGRVK YLLQARKAGH TGALDPRATG LLPLCFGQAT
KVSGWLLDAD KHYVAEAQLG VETDSADLDG AIIREAPVPA IEPERLRALE QQFSGAQEQV
PPMVSALKHD GQRLYELARR GVEVERPPRP VQIHALSIEA IAPERLRIDV RCSKGTYVRS
LVVDIGHALG CGAAVDSLRR IGHGPFEAAA MVTMEQVEAA FEAGGAAAIE AMLQAPETAL
GHWPSVSLNA QASAAMRHGH PADPEAIESR TPGTEGAPVE AESGWPLVRV YDAEGGFLAV
GAREPDGRVR PRRLFVPAP
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