Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0724 |
Symbol | |
ID | 8806476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 776704 |
End bp | 778191 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | NusA antitermination factor |
Protein accession | YP_003459975 |
Protein GI | 289207909 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.188433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAAGG AGATCCTGCT GGTCGCGGAT GCCGTGGCGA ACGAGAAGGG TGTCGACAAA GACATTATTT TCGATGCCCT GGAATCGGCA TTGGCCATGG CGACCCGCAA GTACCATGGC GGCAAGATGG ACGTGCGCGT GAGCATCGAC CGTGAGGAAG GTGACTACGA GGCCTTCCGT CGCTGGACCG TGGTCGATGA CGAGGACCCC GAGTTCGAGT CCCCGGAGTA CCAGATCCTG CTCTCCTACG CGCAGCAGAA AAACCCCGAT GCGCAGGTCG GTGACGTGAT CGAGGAGCCG GTGGAGGCCG TGGATTTCGG CCGTATCGCC GCGCAGACTG CGAAGCAGGT GATCGTGCAG AAGGTGCGCG AGGCCGAGCG CGCCAAGGTG GTCGAGGAGT ACCAGGACCG CGTGGGAACG CTGGTGATGG GTATCGTCAA GCGCACCGAC CGCAACGGCA CCTACGTCGA TCTTGGCAAC AACGCCGAGG CCCTGATCCC GCGCGAACAC ATGATCCCGC GCGAGACCGT GCGCACCAAT GACCGCCTGC GCGGCTATCT CAAGGAGATC CGGCCCGACG CGCGTGGGCC GCAGTTGATC CTGAGCCGTA GCGCGCCGGA GTTCCTGATC GAACTGTTCA AGCTCGAGGT GCCGGAGGTC GGGCAGGAGA TCATCGACAT CATGGGGGCG GCGCGTGATC CGGGCCAGCG TGCGAAGATC GCGGTGCGCT CCAACGACCC GCGCCTGGAC CCGGTCGGTG CCTGCGTCGG CATGCGCGGT TCGCGTGTGC AGTCGGTGTC CAACGAGTTG GCGGGCGAGC GCATCGACAT CATCGTCTGG GACGAGAATC CGGCCCAGTT CGTGATCAAC GCGATGTCCC CGGCCGAGGT CCTGTCGATC GTGGTCGACG AGGACAAGCA GTCGATGGAC ATCGCGGTCG AAGAAGACAA ACTCTCCCTG GCCATCGGCC GCGGCGGGCA GAATATCCGC CTGGCCTCCC AGCTGACCGG CTGGGAGCTG AACGTGATGA CCGAGGAACA GGCAGCCGAG AAGAGCGAGG CCGAGGCCCA GCAGCTGGTG ACCTTCTTCA TGGAGGCGCT GGATGTGGAC GAGGAAGTGG CCGGCATCCT GGTGCAGGAA GGGTTCAGCA CGCTGGACGA GGTGGCCTAT GTCGACGAGG CCGAACTGCT GGCGATCGAG GAGTTCGACG AGGACATCGT GGCCGAGCTG CGCAACCGTG CCAGCGACGC CCTGCTGACC CGCGCGATCG CGGGCGGCGA AAACTACCAG CCTGCCGAGG ATCTGCTGAG CATGGACGGT ATGACCCAGG GCGTGGCCAA CAAGCTGGCC TCGCATGGTG TCTGCACCAT GGAAGACCTC GCGGAGCAGG CAGCCGACGA CGTGGTCGAA ATGACCGGAT TGAGCACGGA AGAGGCGTCC GAGCTGATTA TGACGGCGCG CGCCCCGTGG TTTGAAACCG GGGAATAA
|
Protein sequence | MNKEILLVAD AVANEKGVDK DIIFDALESA LAMATRKYHG GKMDVRVSID REEGDYEAFR RWTVVDDEDP EFESPEYQIL LSYAQQKNPD AQVGDVIEEP VEAVDFGRIA AQTAKQVIVQ KVREAERAKV VEEYQDRVGT LVMGIVKRTD RNGTYVDLGN NAEALIPREH MIPRETVRTN DRLRGYLKEI RPDARGPQLI LSRSAPEFLI ELFKLEVPEV GQEIIDIMGA ARDPGQRAKI AVRSNDPRLD PVGACVGMRG SRVQSVSNEL AGERIDIIVW DENPAQFVIN AMSPAEVLSI VVDEDKQSMD IAVEEDKLSL AIGRGGQNIR LASQLTGWEL NVMTEEQAAE KSEAEAQQLV TFFMEALDVD EEVAGILVQE GFSTLDEVAY VDEAELLAIE EFDEDIVAEL RNRASDALLT RAIAGGENYQ PAEDLLSMDG MTQGVANKLA SHGVCTMEDL AEQAADDVVE MTGLSTEEAS ELIMTARAPW FETGE
|
| |