| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0715 |
|---|
| Symbol | |
|---|
| ID | 8806466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 767783 |
|---|
| End bp | 768847 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_003459966 |
|---|
| Protein GI | 289207900 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.567288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACT GGATGATGAA CTTCTACAGC AGCCTGCCGA CGGTGATGCA GATCCTGATC
GGCATTCAGC TGATCGTGAT CCCGCTGATG CTGGCCGTGG CCTACACGAC CTTCGCCGAG
CGCAAGGTGA TCGGCTATGC GCATGTGCGC GTCGGGCCGA ACCGGGTCGG GCCGCGCGGA
TGGCTGCAGC CGATCGCGGA TGCGCTGAAG CTGCTGACCA AAGAGGTCAT CCTCCCGACC
AATGCCAACC GCTTCCTGTT CCTGAGTGCC CCGGTGCTGA CCATCGCCCC GGCGCTGGCC
GCCTGGGCGG TAATCCCGTT CTTCGAGGGC GGGGCGCTGG CCGATGTGAA CGCCGGTCTG
CTGTACCTGC TGGCACTCAC CTCGCTGGGT GTGTACGGGA TCATCATCGC TGGCTGGGCA
TCGAACTCGA AGTACGCGCT GCTGGGCTCG TTGCGTTCGG CCGCGCAGCT GGTCTCCTAC
GAAATCGCGA TGGGCTTTGC CCTGGTAGGC GTGCTGATGG CCGCGGGCAC GCTGAACGTG
GGCGGGATCA TCGAGGCGCA GTCGGGCAGC ATGTACCACT GGTTCCTGCT GCCGCTGTTG
CCGCTGTTCT TTGTGTATTT CATCTCCGGG ATTGCCGAAA CCAACCGCGC GCCGTTCGAC
GTGGCCGAGG GCGAGTCCGA GATCGTCGCT GGTTTCCACG TCGAGTACTC GGGCATGGCG
TTCGCCGTGT TCTTCCTGGC CGAGTACGCG AACATGATCC TGATCTCGGC CCTGACCGCG
ATCCTGTTCC TCGGCGGCTG GTTGTCGCCG TTCCAGGGCA TCCTGCCGCA GGCGGCCTTT
GACCTGCCGG TCATCGGTGC GTTGCTGGAC CACGGCATCC ACTGGTTCCT GTTCAAGACG
GCGGTGTTCC TGTTCGCCTT CTTGTGGTTC CGCGCCACCT TCCCGCGCTA TCGCTATGAC
CAGATCATGC GTCTGGGCTG GAAGGTGCTG ATCCCGGTGA CCATCCTCTG GCTGTTTGTC
GAGGGCGTGC TGGTCGCGTT CAACGTCGGC CCGTGGTTCG CCTGA
|
|---|
| Protein sequence | MFDWMMNFYS SLPTVMQILI GIQLIVIPLM LAVAYTTFAE RKVIGYAHVR VGPNRVGPRG
WLQPIADALK LLTKEVILPT NANRFLFLSA PVLTIAPALA AWAVIPFFEG GALADVNAGL
LYLLALTSLG VYGIIIAGWA SNSKYALLGS LRSAAQLVSY EIAMGFALVG VLMAAGTLNV
GGIIEAQSGS MYHWFLLPLL PLFFVYFISG IAETNRAPFD VAEGESEIVA GFHVEYSGMA
FAVFFLAEYA NMILISALTA ILFLGGWLSP FQGILPQAAF DLPVIGALLD HGIHWFLFKT
AVFLFAFLWF RATFPRYRYD QIMRLGWKVL IPVTILWLFV EGVLVAFNVG PWFA
|
|---|
| |