| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0710 |
|---|
| Symbol | |
|---|
| ID | 8806461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 761563 |
|---|
| End bp | 762282 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | NADH (or F420H2) dehydrogenase, subunit C |
|---|
| Protein accession | YP_003459961 |
|---|
| Protein GI | 289207895 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.533269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAC AAGACAACTG GATCGACGCC CTGCGGGCGG AACTGGGCGA CGCCCTGGAG
ACGGTCACCG AGGCCTATGA CGAGGTCACC GTCGATATCC GGCCGCAAGC CTGGCGCGAG
GCCGCCGAGA AACTGCGTGA TGCGTTCGGC TTCGAGATGC TGATCGACCT GTGTGGGGTG
GACTATCTCG AATACGGCCA GGACGAGTGG GGCACAGAGT CCGCGACGAA CACGGGTTTC
TCCCGCGGGG TCGAGCCGGC CACCTCCGGG CGATTCACCT TCGATGACGC CCCGGAAGAC
AGCCTCTGGG ACGGGCCGCG CTTTACCGTG GCTGTGCAGC TGCTGTCGAT CCAGCACAAT
CGCCGCCTGC GTATGCGCGC CTGGCTGGCG GATGACGAAT TCCCCGAGGT CGAGTCGCTG
GTGGAGGTCT GGGCCTCGGC CAACTGGTTC GAGCGCGAGG CCTTCGACCT GTTCGGGATC
CTGTTCTCCG GACATCCGGA CCTGCGCCGC ATCCTCACCG ACTACGGCTT TGTCGGCCAC
CCGTTCCGCA AGGACTTCCC GCTGATCGGC CATGTCGAGA TGCGCTACGA CGCCGAGCAG
GCGCGCGTGG TGTACCAGCC GGTGACCATC GAGCCGCGCG TGCTGGTGCC CAAGGTGATC
CGCGACGACC ATCGCTACAG CGAGGGCGAG AAGCCGGGCG AAGGAGCCGA GAATGCCTGA
|
|---|
| Protein sequence | MAEQDNWIDA LRAELGDALE TVTEAYDEVT VDIRPQAWRE AAEKLRDAFG FEMLIDLCGV
DYLEYGQDEW GTESATNTGF SRGVEPATSG RFTFDDAPED SLWDGPRFTV AVQLLSIQHN
RRLRMRAWLA DDEFPEVESL VEVWASANWF EREAFDLFGI LFSGHPDLRR ILTDYGFVGH
PFRKDFPLIG HVEMRYDAEQ ARVVYQPVTI EPRVLVPKVI RDDHRYSEGE KPGEGAENA
|
|---|
| |