| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0671 |
|---|
| Symbol | |
|---|
| ID | 8806420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 714297 |
|---|
| End bp | 715745 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_003459922 |
|---|
| Protein GI | 289207856 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.523068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0127709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACACC TGCCGATCTA TATGCAGTTG CACGGCCGTG AGGCCCTGGT GGTCGGGGCC
GGCCCGGTGG CAACGCGCAA GGCAGCGCTG CTGCTGGAGG CCGGGGCGCG GGTGCGCCTT
CGGGCCCCTG CGTACAGCGA GGCCGCCGAG CGTCTGCTGC GCGAGCACCC GGAGCCGATC
ACCCGCGAGC CGGGTATCTA TGACACCGAA TGCCTGGGTG AAGCGGCGAT CGTGATCGCC
GCCACCGATG ACGCGGCGGT GAACCGCCAG GTCTCCGAGG ACTGCATCGC GCGTGCGATC
CCGGTGAACG TGGCCGACCA GCCGGAGCTT TGCAGCTTCA TCCTGCCGGC CATCGTCGAG
CGCGGCCCGC TGACCATCGC GATCGGCTCC GGTGGCCGGG CACCGGTGCT GGTGCGTCTG
CTGCGCGCGA AGATCGAGAG CCTGATCCCG ACCGGCTACG GGCGCCTGGC GGATCTCGCC
GGTTGCCTGC GCGACCGGGT GCGCGCCCAT TTCGACAGTG TGAACGCGCG GCGCGCCTTC
TGGGAGCGGG CCTTTGCCGG GCCGGCCACC GAGCTGGCCC TGGCCGGGCG CATGGACGCG
GCGGCAGAGC GCTTGGAGCA AGAATTGAAT GAAGCGGATG CCGCCACGCC GGGCGAGGTC
TACCTGATCG GTGCCGGTCC GGGTGATCCG GACCTGCTGA CCTTCCGCGC GTTGCGTCTG
CTGCAGCAGG CCGACGTGGT CGTCTACGAT CGCCTGGTGT CCTCCGAGGT GGTGAACCTG
GCCCGGCGCG AGGCCGAGCG CTTCTATGTC GGCAAGGAGC GTGACCACCA CTGCGTGCCG
CAGGAGGCGA TCAGCGCGCT GCTCTCCCGG CTGGCGCGCG AGGGCAAGCG CGTGGCACGG
CTGAAGGGCG GCGACCCGTT TGTGTTCGGC CGCGGCGGCG AGGAGCTGGA CGTGCTCGCC
CGCGACGGCG TGGCCTACCA GGTGGTGCCC GGCATCACCG CGGCCAGTGG CTGTTCCGCC
TATTCGGGCA TCCCGCTAAC CCACCGTGAT CATGCCCAGT CCGTGCGCTT CATTACCGGC
CATACCCGCG AGGGCCGGCT GGACGTGGAC TGGTCGCAGT TGACGAACAC CCGCGAGACG
CTGGTGTTCT ATATGGGCCG CAAGGGGCTG GGGGAGATCT GCCGCGGGCT CAAGGGTGCG
GGCCGGGCCG GGCGGACCCC GGCCGCGATC ATCGAGAACG GCACCACCGC GCATCAGCGC
GTCGTGACCG GCACGCTGGA CACCCTGGCG GCCCGGGCCG AACGCGAACA GGTCGGTTCG
CCCAGTCTGG TCGTGATCGG CGAGGTCGCC GCCTGTCATC AGCGCCTGGC CTGGTTCCGG
CCGGATGCCG GTGCCGCTGC GACGTTCCCG CAGCCGATGC CGGGGTCCGC GTCCGCGAGC
GCGGCGTGA
|
|---|
| Protein sequence | MEHLPIYMQL HGREALVVGA GPVATRKAAL LLEAGARVRL RAPAYSEAAE RLLREHPEPI
TREPGIYDTE CLGEAAIVIA ATDDAAVNRQ VSEDCIARAI PVNVADQPEL CSFILPAIVE
RGPLTIAIGS GGRAPVLVRL LRAKIESLIP TGYGRLADLA GCLRDRVRAH FDSVNARRAF
WERAFAGPAT ELALAGRMDA AAERLEQELN EADAATPGEV YLIGAGPGDP DLLTFRALRL
LQQADVVVYD RLVSSEVVNL ARREAERFYV GKERDHHCVP QEAISALLSR LAREGKRVAR
LKGGDPFVFG RGGEELDVLA RDGVAYQVVP GITAASGCSA YSGIPLTHRD HAQSVRFITG
HTREGRLDVD WSQLTNTRET LVFYMGRKGL GEICRGLKGA GRAGRTPAAI IENGTTAHQR
VVTGTLDTLA ARAEREQVGS PSLVVIGEVA ACHQRLAWFR PDAGAAATFP QPMPGSASAS
AA
|
|---|
| |