Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0643 |
Symbol | |
ID | 8806392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 682310 |
End bp | 683392 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | geranylgeranyl reductase |
Protein accession | YP_003459894 |
Protein GI | 289207828 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.770726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.124546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCCCCG AGAAGGTCGA TGTCTTGGTC GTCGGTCTGG GGCCGGGCGG TGCCTCGGCG GCGCGTGTAT GCGCGGCGGC CGGCCTGTCG GTCCTGGCGG TCGAGCGTAA CAAGGCCTTC GGCGAGCCGG TACAGTGTGC CGAGTTCATC CCGAACCCGA TGGGCGCCTA TGCCCGGGCG GAGGGGGTCT TGCTGCAGCG CATCGACTCG ATGCAGAGCT TCCTGCCCTC CGGCACCGTG GAGCATTCCG ATTTCCCCGG CCTGATGGTG GATCGTGGGG AATTCGACCG GGCGATCATC CAGGCCGCGC AGGCCAATGG CGCGCAGCTG GTGACTTCGA CCCCGCTGCA ACGTGTGGAT GCCGAGCGGC ATGTGGCGAC CGTGAAGCAC CAGGGACAGG AGCACAGGGT CGAGTACCGT GTGCTGATCG CCGCCGATGG CCCGCATTCC CCGGTGGCCG AGTCCCTGGG CCTGCCCGCG TTGCCGGTCG TACAGACGCG GCAGTACACG GTGCCGCTGA AAAAGCCGTA TACCGCGACC GATGTCTGGC TGTCGGACGA TTACCCGGGT GGATACGCCT GGCTGTTCCC CAAGGGGGAG TGGGCGAACC TGGGACTGGG CGCGGACAAG CGCATCGACA ACGATATGAA GACCCCGCTG GAATCCTTGC ATGTCCAGCT CGTCGAGCAG GGGCTGCTGG GCGAGGAGAT CCGTCACCGC ACAGGCGGCG CGATCCCGGT CGGTGGCCTG CGCGACTCGC TGTACCAGGG CGATGTCCTG TTCGTGGGCG ATGCCGGTGG GTTTACCCAT CCAATCACCG GGGCCGGGAT TGCCGCGGCG GTGGTGTCGG GCGAGGCGGC AGGGGAGGCC GCGATTGGCC ATCTCGAGGG TGACGCCGAG GCCTTTGACG ATTACGATGA GGACATGCGC GATCAGTACG GTCCGGCCCT GGAGCGCGCC TGCAAGCGCC GCGCGTTCCT GAATGAACAC TGGCGGACGC CGCGGGCGCA GGAAGACGCC ACGCAGCGCC GCGGATGGAT TGCTTTTTCC GAGTATTTCA ACGATGGTGA CCAGGCCGCG TAG
|
Protein sequence | MLPEKVDVLV VGLGPGGASA ARVCAAAGLS VLAVERNKAF GEPVQCAEFI PNPMGAYARA EGVLLQRIDS MQSFLPSGTV EHSDFPGLMV DRGEFDRAII QAAQANGAQL VTSTPLQRVD AERHVATVKH QGQEHRVEYR VLIAADGPHS PVAESLGLPA LPVVQTRQYT VPLKKPYTAT DVWLSDDYPG GYAWLFPKGE WANLGLGADK RIDNDMKTPL ESLHVQLVEQ GLLGEEIRHR TGGAIPVGGL RDSLYQGDVL FVGDAGGFTH PITGAGIAAA VVSGEAAGEA AIGHLEGDAE AFDDYDEDMR DQYGPALERA CKRRAFLNEH WRTPRAQEDA TQRRGWIAFS EYFNDGDQAA
|
| |