| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0641 |
|---|
| Symbol | |
|---|
| ID | 8806390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 680010 |
|---|
| End bp | 681188 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003459892 |
|---|
| Protein GI | 289207826 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.071148 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCT GGAACGAGGT GATCCAGCGG GTGGAACCCC TGGAAGACAT CGCTGTCGAT
GCGGCGTTGG TGAATGACCT TCAGCACAGC GTTCAGCGGG GCTCCGATCC AGGATCGGTG
CATTTCTATA CCCCGACGTT CAAGTCGTAC CAGTCCAGCG AACTGGCGGA CTGCGGCAAG
AGCGCCTGGC CGGCGATGTC GATCACCGGT GGCGACTGCA AACTCGCCTG TGACCATTGC
AAGGCGAAGA TCCTGGACCC GATGATCCCG GTGCGTACGC CGGAGGACCT CTGGGCTCAG
GTGAACAACG TGATCGAGTC CGGTGCCCAG GGCATGCTCC TGACCGGTGG CTCGAACCAC
CGTAACGAGG TTGAGTACGA CCCGTACTAC TCCACGATTC GTCGCATCAA GGACGAATTC
CCCGAATTTC GCATTGCGCT GCACACGGCG CTGGTCGATG ACAACATCGC GACGTCGATG
GAGCAGGCCG GCATCGACGC AGCGATGATG GACGTGATCG GTGCCCAGGA CACGATCACG
CAGGTCTACC ATCTGCGCCG CAGCGTGGAG GACTTCGAGC AGACCCTCGA GAGCCTGGTG
AACACCAATA TGAAGGTGGT CCCGCACATC GTGATCGGAC TGCACTACGG CAAGCTGCTG
GGTGAGTGGA ACGCGCTGGA GATGCTTGCG CGCCACCTGC CCGATGCCGT GGTGCTGGTG
GTCGTGATGC CGTTTTACGC CCCGGCCAGT CGCCCCTTCG AGACCCCGGA CGTGCATGCG
GTCGGGCGCT TCTTCCACGA CGCCCGCGAG CGCCTGGGTG ATACCCCGCT GCTGCTCGGT
TGCGCGCGTC CACCGGGCGA GGCCAAGAGC CAGATCGACA GCTATGCGGT GATGGCCGGC
CTGTCCGGGA TTGCGCACCC GGCGGAGGGC GTGGTCGAAC TCGCCGCGCG CCTGGGCAAG
AAGGTCCGCG TGACACCGGC CTGTTGCTCG ATCGCGGTGG GCGACGAGGT GATGGCGGAC
GGTACGGCGG TCGAGAGCGG TGTCGAGATC GACCTGGATA CGATCGTGGC CGAGGAGGCC
CGGCGTCGCG AGCAGGAACG CAAGGCGCGC CAGGGCCTGG GTGGCATCCG CATCGTGACC
GAGGGCAATG TCGCAGCCGG AGGCGGCTGC CATGTCTGA
|
|---|
| Protein sequence | MTTWNEVIQR VEPLEDIAVD AALVNDLQHS VQRGSDPGSV HFYTPTFKSY QSSELADCGK
SAWPAMSITG GDCKLACDHC KAKILDPMIP VRTPEDLWAQ VNNVIESGAQ GMLLTGGSNH
RNEVEYDPYY STIRRIKDEF PEFRIALHTA LVDDNIATSM EQAGIDAAMM DVIGAQDTIT
QVYHLRRSVE DFEQTLESLV NTNMKVVPHI VIGLHYGKLL GEWNALEMLA RHLPDAVVLV
VVMPFYAPAS RPFETPDVHA VGRFFHDARE RLGDTPLLLG CARPPGEAKS QIDSYAVMAG
LSGIAHPAEG VVELAARLGK KVRVTPACCS IAVGDEVMAD GTAVESGVEI DLDTIVAEEA
RRREQERKAR QGLGGIRIVT EGNVAAGGGC HV
|
|---|
| |