Gene TK90_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0627 
Symbol 
ID8806376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp667806 
End bp669617 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content63% 
IMG OID 
Product5'-Nucleotidase domain protein 
Protein accessionYP_003459878 
Protein GI289207812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.367803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATCT CACGCCGCGA ATTCATGCAG CTGCTGGCCG CCGCCAGCGT GGCCGGCTTC 
CCTCTGGCGG GCTGCGCCAA GGCCACCAAT GGCAAGTACG GCACCTCGGG AGACCCGTAC
GACATGCTGG ATCGTTTCGG CAATGTGCAC CTGCTGCACT ACACCGACTG CCATGCGCAG
CTCAAGCCGA TCTATTTCCG CGAGCCCAAC GTGAACCTGG GCGTAGCCGA TATGCGCAAC
CGCCCGCCGC ACATCGTTGG CGAGCACTTC CTCAAGCACT ATGACATCGA ACGCGACAGC
ATCTTTGCCC ACGCCTACAC CAACCTGAAC TTCATGGAGG CGGCCGAACA GTACGGTCGC
GTCGGCGGCT TCCCGCAGCT GAAGACGCTG GTCAAGAAGC TGCGCGACTC GCGCCCCAAC
TCGCTGCTGC TGGACGGTGG CGACACCTGG GGTGGTGGCT CGGGTACCGC GCTGTGGACC
AATGCCCAGG ACATGGTCGA TGCACAGAAG CTGCTGGGCA TCGACATCAT GACCGGCCAC
TGGGAATTCA CCTACGGCGC CGACCGCGTG GAAGAGGTCG TCAACGGCGA TTTCGCCGAT
GCCGGGATCG ACTTCGTCGC CCAGAACGTG CGCGACGTGG ACTGGGGCGA CCTGATCTTC
AAGCCGTACG TGATCCGCGA GTTGAATGGT GTCAACGTTG CCGTGATCGG CCAGGCCTTC
CCCTACACCC CGATCGCCAA CCCGCGCTGG ATGATCGAGC AGTGGTCGTT TGGCATTCGC
CCGGACGACA TGCAGCAGCA GGTCAACGCC GCGCGCGAAG AGGGCGCGGA GATCGTGGTC
GCGCTGTCGC ATAACGGCAT GGACGTGGAC ATCAAGATGG CCGGCATGGT CGAGGGTCTC
GACGCGATCA TGGGCGGTCA CACGCACGAT GCCGTCCCGC AGCCGCTGCC GGTGGAGCGC
CCCGATGGCG GCACCTGCCT GGTCACCAAC GCGGGCTCTA ACGCCAAGTT CGTCGGTGTC
CTGGATTTCG ATTTCCGCGA CGGCGAGATC AAGGACTGGG AATACCGCCT GGTCCCGGTG
TTCGCCAACC TCTTGGACGA AGATCCCGAG ATGGCCGAGT TCGTCGACAA CATGCGCAGC
CAGGACGTCA CCTATGACGG CGACACCTTC AACATGGAGG AGAAGCTCTC CGAAGAGCTG
GCCGTCGCCG AGGACCTGCT GTTCCGCCGT GGCAACTTCA ACGGCACTTT CGACCAGCTA
ATCTGTGATG CGCTGATGGA GGTCCACGAT GCCCAGATCG CGTTCTCGCC GGGCTTCCGC
TGGGGCACGA CCGTACTCCC GGGCATGCCG ATCACCTTCG AGCACATCAT GGACCAGACC
GGCCTGACCT ATCCGGAGAC CACCCGCAAC GCCATGACCG GTGCGCAGAT CAAGGACATC
CTGGAAGACG TCGCCGACAA CCTGTTCAAT GCCGACCCGT TCTACCAGCA GGGTGGCGAC
ATGGTCCGCG TGGGCGGCCT TCGGTATGCG ATCGATCCGG AAGCCGAGAT CGGCAACCGA
ATCTCCGAGA TGGAACTGGG CGGCGAGAAG GTCGACCCGG ACAAGGAATA CGTCGTCGCC
GGCTGGGCCA GCGTCCAGCA GGAGCCGGCG GGCGGTACCG GCACGATGAT CTGGGACAAC
GTCGCCGAGT ACCTGCGCAA CCAGTCCAAT GGTGTTCGCA TCAGCGAACT CAACGAGCCC
AAGGTCAAGG GTATTGGCGA GGACAACCTC GGCTATGTCC CGACAACCGA GGACATGTAC
CGACCCTCCT GA
 
Protein sequence
MHISRREFMQ LLAAASVAGF PLAGCAKATN GKYGTSGDPY DMLDRFGNVH LLHYTDCHAQ 
LKPIYFREPN VNLGVADMRN RPPHIVGEHF LKHYDIERDS IFAHAYTNLN FMEAAEQYGR
VGGFPQLKTL VKKLRDSRPN SLLLDGGDTW GGGSGTALWT NAQDMVDAQK LLGIDIMTGH
WEFTYGADRV EEVVNGDFAD AGIDFVAQNV RDVDWGDLIF KPYVIRELNG VNVAVIGQAF
PYTPIANPRW MIEQWSFGIR PDDMQQQVNA AREEGAEIVV ALSHNGMDVD IKMAGMVEGL
DAIMGGHTHD AVPQPLPVER PDGGTCLVTN AGSNAKFVGV LDFDFRDGEI KDWEYRLVPV
FANLLDEDPE MAEFVDNMRS QDVTYDGDTF NMEEKLSEEL AVAEDLLFRR GNFNGTFDQL
ICDALMEVHD AQIAFSPGFR WGTTVLPGMP ITFEHIMDQT GLTYPETTRN AMTGAQIKDI
LEDVADNLFN ADPFYQQGGD MVRVGGLRYA IDPEAEIGNR ISEMELGGEK VDPDKEYVVA
GWASVQQEPA GGTGTMIWDN VAEYLRNQSN GVRISELNEP KVKGIGEDNL GYVPTTEDMY
RPS