| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0605 |
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| Symbol | |
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| ID | 8806354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 641290 |
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| End bp | 643290 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_003459856 |
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| Protein GI | 289207790 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0935812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.274375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTAC TGGATCGTAG TCTGGAGAAC TTGCTGCGAC TGCCGCGCGG CAAAAAACAG
GGATTGATGG TGCTGGCGGA CATCGTAATG CTGCCGCTGG CACTGTGGCT GGCCTTCGTG
ATTCGTACTG GCCAGACGGT CCCGCCGATG ATGGTCGAGG CCTGGTGGCT GTTTGCGCTG
GTCCCGGCGG TCGGCGCGCT GGTGTTCGCG CGGCTCGGTT TGTATCGAAC GGTCGTGCGG
TTCATGGGGG CCCGCGCGGT GCGTGCGGTG ATCGTCGGCG TCTCCGCGCT GGCGCTGATG
ATCTGGGCCT CGGCCGAACT GACACAGACA CCTGGATTCT TCGGGGCGGT GGCGGTGAAT
TTTGCGCTGC TGGCCTTTGC CCTGGTCGCG GCGGGCCGAT TTGTGGTGCG CAGCTGGTAC
CAGGCCGTGT CCGATGCGCG TACTGGCAGC GAGCGCGTGG TCATCTTTGG CGCCGGTGAG
GCAGGGGTTC AGCTGGCCTC CGGCCTGCAG TCCAGCGGCC GCTTCCGGGT GATGGCCTTC
ATCGACGAGG ACCCGGCGGT CCAGGGGCGT TCGATTGACG ATATCCCGGT CTGTGGCCGC
GAGGCCCTGG GCACGCTGGT GGAGCAGTGT GGCGTGCGCC GGGTATTGCT GGCGGTGCCG
TCGGCGAGCC GGGCCGATCG CCGGCGCATC CTCGAATGGC TGGAGCCCTA TCCGCTGCAT
GTGCAGTCGG TGCCCTCGCT GGAGGCGGTC GTCTCGGGCC GGGCCCCCCT GGATCAGCTG
GAGGACCTGG ATGTCGCCGA CCTGCTGGGC CGCGATCCGG TGCCGCCCAA CGAGGCCCTG
CTGGCTCGGA GCATCCGCGG ACGCGTGGTG ATGGTCACCG GCGCCGGGGG CTCTATCGGT
TCGGAGCTTT GCCGCCGCAT CCTCAGTCTG GAGCCGGCCG CCCTGGTGCT GTTCGAGCGT
AACGAGTTCG CGCTCTACCG GATCGAACAG GAGATCATGC AGCGGCGGTT GTCCATGCAG
CCGGGCGTCG AGGTGCACGC GGTGCTGGGC TCGGTCGCCA ACCAGGCGCG CGTCGAAGAG
GTCCTCCACC AGTATGGCGT GCAGACGCTC TACCACGCGG CCGCCTACAA GCATGTGCCG
CTGGTCGAGG GCAATCTGCT GGAAGGCCTG CGCAACAACA GCCTGGGCAC CGCCGTGGTG
GCCGATGCGG CGATCGCCGC CGGCGTCGAG CGTTTTATCC TGGTGAGCAC GGACAAGGCC
GTGCGGCCCA CGAACGTGAT GGGCGCGAGC AAGCGCCTGG CCGAGATGGT GCTGCAGGAC
CGCGCACGCC GTCAGAATGC AACGGTGTTC AGCATGGTGC GGTTCGGCAA CGTCCTGGGT
TCTTCCGGGT CCGTCGTACC CCTGTTCCAC CGCCAGATTC GCGAAGGTGG GCCGGTCACG
GTGACTCACC CGGAGATTAC CCGCTACTTC ATGTCGATCC CGGAGGCCGC CGAGCTGGTG
ATTCAGGCCG GGGCGATGGC GCAGGGGGGC GAGGTCTATG TGCTCGACAT GGGCGAACCG
GTGCGCATCA TCGACCTGGC CCGGCGCATG ATCCGTCTGC ACGGCCATCA GGTCCGGGAG
GACGAGGCCG AAGGGGAAGG TATTGCCATC ACCTGTACCG GCCTGCGTCC CGGCGAGAAG
CTCTACGAGG AATTGCTGAT CGGGGATAAC GTGGAAGAGA CCCCGCACAG CAAGATCATG
CGTGCACGCG AAACCTGTGC GGAGCCGGCG GTTCTCGCCC GCGCCCTGCG CACGCTGGAG
AAGGCCGACC GCGAACGCAA TGCCCAGGCC GCGTTCGAGG TGCTGCGCGA GGTCGTCGAT
GGTTACGAGC CGGGCCGCGA TGAAGAGGCC GCTCACAGTG CCTCTGCACC GGTCGGACGG
CCCCGCCCGG CTCCGGCCCC GACCGTGCGT CCGGCGGCAG TCGCCTATGC ACGGGTGGCC
GATCCGGTGG TTCCGCGCTA G
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| Protein sequence | MAVLDRSLEN LLRLPRGKKQ GLMVLADIVM LPLALWLAFV IRTGQTVPPM MVEAWWLFAL
VPAVGALVFA RLGLYRTVVR FMGARAVRAV IVGVSALALM IWASAELTQT PGFFGAVAVN
FALLAFALVA AGRFVVRSWY QAVSDARTGS ERVVIFGAGE AGVQLASGLQ SSGRFRVMAF
IDEDPAVQGR SIDDIPVCGR EALGTLVEQC GVRRVLLAVP SASRADRRRI LEWLEPYPLH
VQSVPSLEAV VSGRAPLDQL EDLDVADLLG RDPVPPNEAL LARSIRGRVV MVTGAGGSIG
SELCRRILSL EPAALVLFER NEFALYRIEQ EIMQRRLSMQ PGVEVHAVLG SVANQARVEE
VLHQYGVQTL YHAAAYKHVP LVEGNLLEGL RNNSLGTAVV ADAAIAAGVE RFILVSTDKA
VRPTNVMGAS KRLAEMVLQD RARRQNATVF SMVRFGNVLG SSGSVVPLFH RQIREGGPVT
VTHPEITRYF MSIPEAAELV IQAGAMAQGG EVYVLDMGEP VRIIDLARRM IRLHGHQVRE
DEAEGEGIAI TCTGLRPGEK LYEELLIGDN VEETPHSKIM RARETCAEPA VLARALRTLE
KADRERNAQA AFEVLREVVD GYEPGRDEEA AHSASAPVGR PRPAPAPTVR PAAVAYARVA
DPVVPR
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